Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.25□□□□□ -0.13
VPS13BQ7Z7G8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 AC005703.6-201ENST00000623265 1329 ntBASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13BQ7Z7G8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 AC008764.7-201ENST00000593779 1081 ntBASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
VPS13BQ7Z7G8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 AC099791.1-201ENST00000416440 715 ntBASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS13BQ7Z7G8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 ABHD17AP1-201ENST00000358206 933 ntBASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13BQ7Z7G8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
VPS13BQ7Z7G8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 AC092803.2-201ENST00000564287 1899 ntBASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.2□□□□□ -0.14
VPS13BQ7Z7G8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 AC009102.2-201ENST00000606772 1639 ntBASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 AL358852.1-201ENST00000623174 1268 ntBASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13BQ7Z7G8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms