Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SERBP1P1-201ENST00000396021 1160 ntBASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAI1Q7Z5J4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.61■□□□□ 0.73
RAI1Q7Z5J4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 MIR4767-201ENST00000582827 78 ntBASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAI1Q7Z5J4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.59■□□□□ 0.73
RAI1Q7Z5J4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 AC138932.3-201ENST00000567634 1902 ntBASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 SYT6-210ENST00000641643 1587 ntBASIC19.58■□□□□ 0.73
RAI1Q7Z5J4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI1Q7Z5J4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
RAI1Q7Z5J4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.58■□□□□ 0.72
RAI1Q7Z5J4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RAI1Q7Z5J4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI1Q7Z5J4 RASA4CP-201ENST00000424092 1398 ntBASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 MIR5787-201ENST00000611784 55 ntBASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI1Q7Z5J4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAI1Q7Z5J4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 AC091305.1-201ENST00000479476 895 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 AC099791.2-201ENST00000605725 427 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 AC097381.1-201ENST00000429019 1296 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 AC027682.1-201ENST00000562846 899 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 AL138724.1-201ENST00000606771 1088 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 CA15P2-201ENST00000611168 834 ntBASIC19.55■□□□□ 0.72
RAI1Q7Z5J4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI1Q7Z5J4 AC009102.2-201ENST00000606772 1639 ntBASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 MIR6821-201ENST00000617625 74 ntBASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAI1Q7Z5J4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms