Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP50Q70EL3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.39■■□□□ 1.98
USP50Q70EL3 MIR572-201ENST00000384983 95 ntBASIC27.39■■□□□ 1.98
USP50Q70EL3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
USP50Q70EL3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
USP50Q70EL3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.38■■□□□ 1.97
USP50Q70EL3 AL354811.1-201ENST00000610286 706 ntBASIC27.38■■□□□ 1.97
USP50Q70EL3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
USP50Q70EL3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP50Q70EL3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.38■■□□□ 1.97
USP50Q70EL3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.37■■□□□ 1.97
USP50Q70EL3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP50Q70EL3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC27.37■■□□□ 1.97
USP50Q70EL3 AC012414.1-201ENST00000556676 535 ntBASIC27.37■■□□□ 1.97
USP50Q70EL3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.37■■□□□ 1.97
USP50Q70EL3 MIR6084-201ENST00000622012 110 ntBASIC27.37■■□□□ 1.97
USP50Q70EL3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
USP50Q70EL3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
USP50Q70EL3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP50Q70EL3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP50Q70EL3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.36■■□□□ 1.97
USP50Q70EL3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
USP50Q70EL3 pRNA.6-201ENST00000610482 90 ntBASIC27.36■■□□□ 1.97
USP50Q70EL3 pRNA.5-201ENST00000612139 90 ntBASIC27.36■■□□□ 1.97
USP50Q70EL3 pRNA.11-201ENST00000618423 90 ntBASIC27.36■■□□□ 1.97
USP50Q70EL3 pRNA.13-201ENST00000619112 90 ntBASIC27.36■■□□□ 1.97
USP50Q70EL3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP50Q70EL3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP50Q70EL3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP50Q70EL3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.36■■□□□ 1.97
USP50Q70EL3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.35■■□□□ 1.97
USP50Q70EL3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP50Q70EL3 IGHV3-19-201ENST00000521488 291 ntBASIC27.35■■□□□ 1.97
USP50Q70EL3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.35■■□□□ 1.97
USP50Q70EL3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.35■■□□□ 1.97
USP50Q70EL3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.35■■□□□ 1.97
USP50Q70EL3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
USP50Q70EL3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP50Q70EL3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP50Q70EL3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.34■■□□□ 1.97
USP50Q70EL3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.34■■□□□ 1.97
USP50Q70EL3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.34■■□□□ 1.97
USP50Q70EL3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP50Q70EL3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.34■■□□□ 1.97
USP50Q70EL3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.34■■□□□ 1.97
USP50Q70EL3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
USP50Q70EL3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
USP50Q70EL3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP50Q70EL3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
USP50Q70EL3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.33■■□□□ 1.97
USP50Q70EL3 KRT18P14-201ENST00000534205 1250 ntBASIC27.33■■□□□ 1.97
USP50Q70EL3 AL022069.1-201ENST00000568025 1636 ntBASIC27.33■■□□□ 1.97
USP50Q70EL3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
USP50Q70EL3 ERN1-208ENST00000606895 2068 ntBASIC27.32■■□□□ 1.96
USP50Q70EL3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
USP50Q70EL3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
USP50Q70EL3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.32■■□□□ 1.96
USP50Q70EL3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.32■■□□□ 1.96
USP50Q70EL3 TERF1P2-201ENST00000583350 1212 ntBASIC27.32■■□□□ 1.96
USP50Q70EL3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.32■■□□□ 1.96
USP50Q70EL3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.32■■□□□ 1.96
USP50Q70EL3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP50Q70EL3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP50Q70EL3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP50Q70EL3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.31■■□□□ 1.96
USP50Q70EL3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.31■■□□□ 1.96
USP50Q70EL3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
USP50Q70EL3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
USP50Q70EL3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP50Q70EL3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
USP50Q70EL3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
USP50Q70EL3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
USP50Q70EL3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.31■■□□□ 1.96
USP50Q70EL3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
USP50Q70EL3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP50Q70EL3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.3■■□□□ 1.96
USP50Q70EL3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.3■■□□□ 1.96
USP50Q70EL3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.3■■□□□ 1.96
USP50Q70EL3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP50Q70EL3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.29■■□□□ 1.96
USP50Q70EL3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.29■■□□□ 1.96
USP50Q70EL3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
USP50Q70EL3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP50Q70EL3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.29■■□□□ 1.96
USP50Q70EL3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP50Q70EL3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
USP50Q70EL3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
USP50Q70EL3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC27.28■■□□□ 1.96
USP50Q70EL3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.28■■□□□ 1.96
USP50Q70EL3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP50Q70EL3 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
USP50Q70EL3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms