Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 LINC01124-201ENST00000409786 2117 ntBASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LCNL1Q6ZST4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 AC131281.2-201ENST00000520478 145 ntBASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 MIR3621-201ENST00000580529 85 ntBASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 AL356740.2-201ENST00000601559 647 ntBASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LCNL1Q6ZST4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LCNL1Q6ZST4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.85■□□□□ 0.45
LCNL1Q6ZST4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 AL139125.2-201ENST00000623134 1869 ntBASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCNL1Q6ZST4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LCNL1Q6ZST4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCNL1Q6ZST4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 AC005703.6-201ENST00000623265 1329 ntBASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 MIR4466-201ENST00000606121 54 ntBASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.82■□□□□ 0.44
LCNL1Q6ZST4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 AL136116.3-201ENST00000402907 1138 ntBASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LCNL1Q6ZST4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCNL1Q6ZST4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCNL1Q6ZST4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.8■□□□□ 0.44
LCNL1Q6ZST4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LCNL1Q6ZST4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms