Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RTL4Q6ZR62 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 MIR6722-201ENST00000617286 78 ntBASIC21.22■□□□□ 0.99
RTL4Q6ZR62 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTL4Q6ZR62 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTL4Q6ZR62 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
RTL4Q6ZR62 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL4Q6ZR62 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTL4Q6ZR62 AC004448.1-201ENST00000458332 883 ntBASIC21.2■□□□□ 0.98
RTL4Q6ZR62 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.2■□□□□ 0.98
RTL4Q6ZR62 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
RTL4Q6ZR62 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTL4Q6ZR62 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RTL4Q6ZR62 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 AL356740.2-201ENST00000601559 647 ntBASIC21.16■□□□□ 0.98
RTL4Q6ZR62 AL117332.1-201ENST00000622628 974 ntBASIC21.16■□□□□ 0.98
RTL4Q6ZR62 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTL4Q6ZR62 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RTL4Q6ZR62 AC131274.2-201ENST00000580697 1507 ntBASIC21.14■□□□□ 0.98
RTL4Q6ZR62 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RTL4Q6ZR62 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
RTL4Q6ZR62 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RTL4Q6ZR62 AC008406.3-201ENST00000620001 1374 ntBASIC21.14■□□□□ 0.98
RTL4Q6ZR62 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms