Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 AL354811.1-201ENST00000610286 706 ntBASIC35.36■■■■□ 3.25
CD109Q6YHK3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CD109Q6YHK3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC35.35■■■■□ 3.25
CD109Q6YHK3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC35.35■■■■□ 3.25
CD109Q6YHK3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
CD109Q6YHK3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC35.34■■■■□ 3.25
CD109Q6YHK3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CD109Q6YHK3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC35.34■■■■□ 3.25
CD109Q6YHK3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
CD109Q6YHK3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC35.33■■■■□ 3.25
CD109Q6YHK3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC35.33■■■■□ 3.25
CD109Q6YHK3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
CD109Q6YHK3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
CD109Q6YHK3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
CD109Q6YHK3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC35.32■■■■□ 3.25
CD109Q6YHK3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
CD109Q6YHK3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC35.32■■■■□ 3.24
CD109Q6YHK3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CD109Q6YHK3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
CD109Q6YHK3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC35.32■■■■□ 3.24
CD109Q6YHK3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CD109Q6YHK3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CD109Q6YHK3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
CD109Q6YHK3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC35.31■■■■□ 3.24
CD109Q6YHK3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CD109Q6YHK3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
CD109Q6YHK3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC35.3■■■■□ 3.24
CD109Q6YHK3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CD109Q6YHK3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC35.3■■■■□ 3.24
CD109Q6YHK3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.3■■■■□ 3.24
CD109Q6YHK3 AC139426.1-201ENST00000568218 2529 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CD109Q6YHK3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
CD109Q6YHK3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CD109Q6YHK3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
CD109Q6YHK3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC35.29■■■■□ 3.24
CD109Q6YHK3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC35.29■■■■□ 3.24
CD109Q6YHK3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CD109Q6YHK3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC35.29■■■■□ 3.24
CD109Q6YHK3 pRNA.6-201ENST00000610482 90 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 pRNA.5-201ENST00000612139 90 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 pRNA.11-201ENST00000618423 90 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 pRNA.13-201ENST00000619112 90 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC35.29■■■■□ 3.24
CD109Q6YHK3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC35.28■■■■□ 3.24
CD109Q6YHK3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC35.28■■■■□ 3.24
CD109Q6YHK3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CD109Q6YHK3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC35.27■■■■□ 3.24
CD109Q6YHK3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC35.27■■■■□ 3.24
CD109Q6YHK3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 AC080038.1-201ENST00000611274 1154 ntBASIC35.27■■■■□ 3.24
CD109Q6YHK3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CD109Q6YHK3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.26■■■■□ 3.24
CD109Q6YHK3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.24
CD109Q6YHK3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC35.26■■■■□ 3.24
CD109Q6YHK3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.24
CD109Q6YHK3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CD109Q6YHK3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
CD109Q6YHK3 GXYLT1P5-201ENST00000614548 1189 ntBASIC35.25■■■■□ 3.23
CD109Q6YHK3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC35.25■■■■□ 3.23
CD109Q6YHK3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC35.25■■■■□ 3.23
CD109Q6YHK3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CD109Q6YHK3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CD109Q6YHK3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC35.24■■■■□ 3.23
CD109Q6YHK3 AC006015.1-201ENST00000429970 570 ntBASIC35.23■■■■□ 3.23
CD109Q6YHK3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CD109Q6YHK3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CD109Q6YHK3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CD109Q6YHK3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC35.23■■■■□ 3.23
CD109Q6YHK3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CD109Q6YHK3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CD109Q6YHK3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.22■■■■□ 3.23
CD109Q6YHK3 LINC02228-203ENST00000641970 1355 ntBASIC35.22■■■■□ 3.23
CD109Q6YHK3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CD109Q6YHK3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC35.22■■■■□ 3.23
CD109Q6YHK3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CD109Q6YHK3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC35.22■■■■□ 3.23
CD109Q6YHK3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC35.21■■■■□ 3.23
CD109Q6YHK3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC35.21■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms