Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 DUX4L19-201ENST00000557448 1267 ntBASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
DCLRE1AQ6PJP8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
DCLRE1AQ6PJP8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 AC092171.4-201ENST00000609130 632 ntBASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
DCLRE1AQ6PJP8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
DCLRE1AQ6PJP8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 AC135279.3-201ENST00000610945 1311 ntBASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
DCLRE1AQ6PJP8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 AC142381.3-201ENST00000568208 1670 ntBASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
DCLRE1AQ6PJP8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 AC024257.2-201ENST00000549699 147 ntBASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.43■■□□□ 1.5
DCLRE1AQ6PJP8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 ALDH1A3-203ENST00000557963 1670 ntBASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
DCLRE1AQ6PJP8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 SYT6-210ENST00000641643 1587 ntBASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.41■■□□□ 1.5
DCLRE1AQ6PJP8 C17orf82-201ENST00000623772 1530 ntBASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 AC099791.2-201ENST00000605725 427 ntBASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
DCLRE1AQ6PJP8 AC138932.3-201ENST00000567634 1902 ntBASIC24.39■■□□□ 1.5
DCLRE1AQ6PJP8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
DCLRE1AQ6PJP8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.39■■□□□ 1.5
DCLRE1AQ6PJP8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.39■■□□□ 1.5
DCLRE1AQ6PJP8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
DCLRE1AQ6PJP8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.39■■□□□ 1.49
DCLRE1AQ6PJP8 AL031432.3-201ENST00000607698 485 ntBASIC24.39■■□□□ 1.49
DCLRE1AQ6PJP8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
DCLRE1AQ6PJP8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
DCLRE1AQ6PJP8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
DCLRE1AQ6PJP8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 EDA-201ENST00000338901 1233 ntBASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 SUDS3P1-201ENST00000505831 966 ntBASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
DCLRE1AQ6PJP8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AC142381.2-201ENST00000566120 298 ntBASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AL355001.2-201ENST00000620617 1191 ntBASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AC241377.3-202ENST00000626088 1088 ntBASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AC241585.3-202ENST00000628937 1088 ntBASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AC245100.8-202ENST00000629247 1058 ntBASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
DCLRE1AQ6PJP8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
DCLRE1AQ6PJP8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms