Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 AC010997.5-201ENST00000609182 354 ntBASIC23.83■■□□□ 1.41
RNF43Q68DV7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF43Q68DV7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RNF43Q68DV7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF43Q68DV7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
RNF43Q68DV7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.83■■□□□ 1.4
RNF43Q68DV7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.83■■□□□ 1.4
RNF43Q68DV7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF43Q68DV7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF43Q68DV7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF43Q68DV7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RNF43Q68DV7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF43Q68DV7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF43Q68DV7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
RNF43Q68DV7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF43Q68DV7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF43Q68DV7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF43Q68DV7 MIR6722-201ENST00000617286 78 ntBASIC23.81■■□□□ 1.4
RNF43Q68DV7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF43Q68DV7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF43Q68DV7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 MTDHP2-201ENST00000601468 714 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 AC005837.3-201ENST00000612163 286 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 MIR6724-1-201ENST00000616420 92 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 MIR6724-2-201ENST00000616483 92 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 MIR6724-4-201ENST00000617390 92 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 MIR6724-3-201ENST00000622482 92 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF43Q68DV7 LINC01124-201ENST00000409786 2117 ntBASIC23.8■■□□□ 1.4
RNF43Q68DV7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF43Q68DV7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF43Q68DV7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF43Q68DV7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF43Q68DV7 AC110285.6-201ENST00000617652 491 ntBASIC23.79■■□□□ 1.4
RNF43Q68DV7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF43Q68DV7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 AC004448.1-201ENST00000458332 883 ntBASIC23.78■■□□□ 1.4
RNF43Q68DV7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF43Q68DV7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF43Q68DV7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF43Q68DV7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
RNF43Q68DV7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF43Q68DV7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF43Q68DV7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF43Q68DV7 MIR3621-201ENST00000580529 85 ntBASIC23.77■■□□□ 1.4
RNF43Q68DV7 AL117332.1-201ENST00000622628 974 ntBASIC23.77■■□□□ 1.4
RNF43Q68DV7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF43Q68DV7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF43Q68DV7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF43Q68DV7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
RNF43Q68DV7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF43Q68DV7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF43Q68DV7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF43Q68DV7 AC131274.2-201ENST00000580697 1507 ntBASIC23.75■■□□□ 1.39
RNF43Q68DV7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF43Q68DV7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RNF43Q68DV7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF43Q68DV7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF43Q68DV7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF43Q68DV7 AC096631.2-201ENST00000436136 790 ntBASIC23.74■■□□□ 1.39
RNF43Q68DV7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
RNF43Q68DV7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RNF43Q68DV7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF43Q68DV7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms