Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC007375.3-201ENST00000600936 2314 ntBASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ANKRD55Q3KP44 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ANKRD55Q3KP44 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ANKRD55Q3KP44 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.89■□□□□ 0.62
ANKRD55Q3KP44 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ANKRD55Q3KP44 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ANKRD55Q3KP44 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.87■□□□□ 0.61
ANKRD55Q3KP44 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.86■□□□□ 0.61
ANKRD55Q3KP44 SMPD5-203ENST00000639008 1464 ntBASIC18.85■□□□□ 0.61
ANKRD55Q3KP44 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
ANKRD55Q3KP44 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ANKRD55Q3KP44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ANKRD55Q3KP44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ANKRD55Q3KP44 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 AL024507.2-201ENST00000606070 2574 ntBASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ANKRD55Q3KP44 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ANKRD55Q3KP44 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ANKRD55Q3KP44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ANKRD55Q3KP44 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ANKRD55Q3KP44 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.83■□□□□ 0.6
ANKRD55Q3KP44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.82■□□□□ 0.6
ANKRD55Q3KP44 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.81■□□□□ 0.6
ANKRD55Q3KP44 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms