Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 RME1YGR044C 903 nt6.26□□□□□ -1.41
UBP3Q01477 DJP1YIR004W 1299 nt6.26□□□□□ -1.41
UBP3Q01477 SPO7YAL009W 780 nt6.26□□□□□ -1.41
UBP3Q01477 CKA2YOR061W 1020 nt6.26□□□□□ -1.41
UBP3Q01477 ECM8YBR076W 1065 nt6.26□□□□□ -1.41
UBP3Q01477 SAS10YDL153C 1833 nt6.26□□□□□ -1.41
UBP3Q01477 VPS4YPR173C 1314 nt6.25□□□□□ -1.41 RIP-Chip
UBP3Q01477 YTA12YMR089C 2478 nt6.25□□□□□ -1.41
UBP3Q01477 PDR18YNR070W 4002 nt6.25□□□□□ -1.41
UBP3Q01477 RRG1YDR065W 1098 nt6.25□□□□□ -1.41
UBP3Q01477 UBC1YDR177W 648 nt6.25□□□□□ -1.41
UBP3Q01477 DFM1YDR411C 1026 nt6.25□□□□□ -1.41
UBP3Q01477 SEC20YDR498C 1152 nt6.25□□□□□ -1.41
UBP3Q01477 IRC6YFR043C 714 nt6.25□□□□□ -1.41
UBP3Q01477 PAN5YHR063C 1140 nt6.25□□□□□ -1.41
UBP3Q01477 IMP3YHR148W 552 nt6.25□□□□□ -1.41
UBP3Q01477 CBF1YJR060W 1056 nt6.25□□□□□ -1.41
UBP3Q01477 YLR126CYLR126C 756 nt6.25□□□□□ -1.41
UBP3Q01477 AAH1YNL141W 1044 nt6.25□□□□□ -1.41
UBP3Q01477 HSE1YHL002W 1359 nt6.24□□□□□ -1.41
UBP3Q01477 HAP2YGL237C 798 nt6.24□□□□□ -1.41 RIP-Chip
UBP3Q01477 EST3YIL009C-A 546 nt6.24□□□□□ -1.41
UBP3Q01477 CPR6YLR216C 1116 nt6.24□□□□□ -1.41
UBP3Q01477 SRL4YPL033C 846 nt6.24□□□□□ -1.41
UBP3Q01477 YPR153WYPR153W 423 nt6.24□□□□□ -1.41
UBP3Q01477 YBR144CYBR144C 315 nt6.24□□□□□ -1.41
UBP3Q01477 RRT2YBR246W 1164 nt6.24□□□□□ -1.41
UBP3Q01477 HXT4YHR092C 1731 nt6.24□□□□□ -1.41
UBP3Q01477 RAD7YJR052W 1698 nt6.23□□□□□ -1.41
UBP3Q01477 ISN1YOR155C 1353 nt6.23□□□□□ -1.41
UBP3Q01477 TEL2YGR099W 2067 nt6.23□□□□□ -1.41
UBP3Q01477 YIR021W-AYIR021W-A 213 nt6.23□□□□□ -1.41
UBP3Q01477 YLR407WYLR407W 687 nt6.23□□□□□ -1.41
UBP3Q01477 YNL174WYNL174W 573 nt6.23□□□□□ -1.41
UBP3Q01477 YOR097CYOR097C 528 nt6.23□□□□□ -1.41 RIP-Chip
UBP3Q01477 MPD1YOR288C 957 nt6.23□□□□□ -1.41
UBP3Q01477 PRM2YIL037C 1971 nt6.23□□□□□ -1.41 RIP-Chip
UBP3Q01477 TMN2YDR107C 2019 nt6.23□□□□□ -1.41
UBP3Q01477 CNA1YLR433C 1662 nt6.23□□□□□ -1.41
UBP3Q01477 GYP1YOR070C 1914 nt6.23□□□□□ -1.41 RIP-Chip
UBP3Q01477 TEC1YBR083W 1461 nt6.22□□□□□ -1.41
UBP3Q01477 AIM10YER087W 1731 nt6.22□□□□□ -1.41
UBP3Q01477 VAN1YML115C 1608 nt6.22□□□□□ -1.41
UBP3Q01477 STE13YOR219C 2796 nt6.22□□□□□ -1.41
UBP3Q01477 CRZ1YNL027W 2037 nt6.22□□□□□ -1.41
UBP3Q01477 YDR220CYDR220C 294 nt6.22□□□□□ -1.41
UBP3Q01477 BTT1YDR252W 450 nt6.22□□□□□ -1.41
UBP3Q01477 ATO3YDR384C 828 nt6.22□□□□□ -1.41 RIP-Chip
UBP3Q01477 YIL152WYIL152W 708 nt6.22□□□□□ -1.41
UBP3Q01477 YJL032WYJL032W 315 nt6.22□□□□□ -1.41
UBP3Q01477 RSM26YJR101W 801 nt6.22□□□□□ -1.41
UBP3Q01477 YKL071WYKL071W 771 nt6.22□□□□□ -1.41
UBP3Q01477 EMG1YLR186W 759 nt6.22□□□□□ -1.41
UBP3Q01477 YLR374CYLR374C 390 nt6.22□□□□□ -1.41
UBP3Q01477 YNL217WYNL217W 981 nt6.22□□□□□ -1.41
UBP3Q01477 TLG2YOL018C 1194 nt6.22□□□□□ -1.41 RIP-Chip
UBP3Q01477 RPS9AYPL081W 594 nt6.22□□□□□ -1.41
UBP3Q01477 NAT3YPR131C 588 nt6.22□□□□□ -1.41
UBP3Q01477 DIA3YDL024C 1407 nt6.22□□□□□ -1.41
UBP3Q01477 ASA1YPR085C 1332 nt6.22□□□□□ -1.41
UBP3Q01477 MCM6YGL201C 3054 nt6.22□□□□□ -1.41
UBP3Q01477 SCT1YBL011W 2280 nt6.22□□□□□ -1.41
UBP3Q01477 YDL109CYDL109C 1944 nt6.21□□□□□ -1.41
UBP3Q01477 YML082WYML082W 1950 nt6.21□□□□□ -1.42
UBP3Q01477 RPS2YGL123W 765 nt6.21□□□□□ -1.42
UBP3Q01477 YGL258W-AYGL258W-A 234 nt6.21□□□□□ -1.42
UBP3Q01477 VMA6YLR447C 1038 nt6.21□□□□□ -1.42
UBP3Q01477 AAD15YOL165C 432 nt6.21□□□□□ -1.42
UBP3Q01477 YBR134WYBR134W 402 nt6.21□□□□□ -1.42
UBP3Q01477 TCM62YBR044C 1719 nt6.21□□□□□ -1.42
UBP3Q01477 VPS5YOR069W 2028 nt6.21□□□□□ -1.42
UBP3Q01477 MRK1YDL079C 1506 nt6.2□□□□□ -1.42
UBP3Q01477 SSU1YPL092W 1377 nt6.2□□□□□ -1.42
UBP3Q01477 HIR1YBL008W 2523 nt6.2□□□□□ -1.42 RIP-Chip
UBP3Q01477 YER085CYER085C 522 nt6.2□□□□□ -1.42
UBP3Q01477 RRP4YHR069C 1080 nt6.2□□□□□ -1.42
UBP3Q01477 URA5YML106W 681 nt6.2□□□□□ -1.42
UBP3Q01477 YBL036CYBL036C 774 nt6.2□□□□□ -1.42
UBP3Q01477 GSP2YOR185C 663 nt6.2□□□□□ -1.42
UBP3Q01477 BDP1YNL039W 1785 nt6.2□□□□□ -1.42
UBP3Q01477 RNY1YPL123C 1305 nt6.2□□□□□ -1.42
UBP3Q01477 MRC1YCL061C 3291 nt6.19□□□□□ -1.42
UBP3Q01477 GLE2YER107C 1098 nt6.19□□□□□ -1.42
UBP3Q01477 YFL019CYFL019C 354 nt6.19□□□□□ -1.42
UBP3Q01477 CAB4YGR277C 918 nt6.19□□□□□ -1.42 RIP-Chip
UBP3Q01477 RPL10YLR075W 666 nt6.19□□□□□ -1.42
UBP3Q01477 HRT3YLR097C 1035 nt6.19□□□□□ -1.42
UBP3Q01477 STM1YLR150W 822 nt6.19□□□□□ -1.42 RIP-Chip
UBP3Q01477 TAP42YMR028W 1101 nt6.19□□□□□ -1.42 RIP-Chip
UBP3Q01477 ROT1YMR200W 771 nt6.19□□□□□ -1.42
UBP3Q01477 SHP1YBL058W 1272 nt6.19□□□□□ -1.42 RIP-Chip
UBP3Q01477 IZH4YOL101C 939 nt6.19□□□□□ -1.42
UBP3Q01477 PCL8YPL219W 1479 nt6.19□□□□□ -1.42
UBP3Q01477 YDR098C-AYDR098C-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YDR210C-CYDR210C-C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YDR261C-CYDR261C-C 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YDR316W-AYDR316W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YDR365W-AYDR365W-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YER137C-AYER137C-A 1323 nt6.19□□□□□ -1.42
UBP3Q01477 YER159C-AYER159C-A 1323 nt6.19□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms