Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN20P56880 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLDN20P56880 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN20P56880 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN20P56880 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN20P56880 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN20P56880 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN20P56880 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN20P56880 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN20P56880 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CLDN20P56880 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN20P56880 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CLDN20P56880 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CLDN20P56880 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN20P56880 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN20P56880 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.8■□□□□ 0.92
CLDN20P56880 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN20P56880 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN20P56880 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN20P56880 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN20P56880 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN20P56880 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN20P56880 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN20P56880 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN20P56880 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.79■□□□□ 0.92
CLDN20P56880 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN20P56880 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLDN20P56880 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN20P56880 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLDN20P56880 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.78■□□□□ 0.92
CLDN20P56880 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN20P56880 SNX5-217ENST00000606557 1087 ntBASIC20.78■□□□□ 0.92
CLDN20P56880 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.78■□□□□ 0.92
CLDN20P56880 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CLDN20P56880 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN20P56880 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.78■□□□□ 0.92
CLDN20P56880 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN20P56880 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN20P56880 KRT16P3-201ENST00000439127 1283 ntBASIC20.77■□□□□ 0.92
CLDN20P56880 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN20P56880 AC131274.2-201ENST00000580697 1507 ntBASIC20.77■□□□□ 0.92
CLDN20P56880 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.77■□□□□ 0.92
CLDN20P56880 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN20P56880 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN20P56880 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN20P56880 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN20P56880 MTDHP2-201ENST00000601468 714 ntBASIC20.76■□□□□ 0.91
CLDN20P56880 AC010997.5-201ENST00000609182 354 ntBASIC20.76■□□□□ 0.91
CLDN20P56880 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN20P56880 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN20P56880 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN20P56880 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN20P56880 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN20P56880 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN20P56880 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
CLDN20P56880 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN20P56880 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.75■□□□□ 0.91
CLDN20P56880 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CLDN20P56880 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN20P56880 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
CLDN20P56880 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN20P56880 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN20P56880 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN20P56880 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN20P56880 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLDN20P56880 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 LINC01124-201ENST00000409786 2117 ntBASIC20.73■□□□□ 0.91
CLDN20P56880 AC004448.1-201ENST00000458332 883 ntBASIC20.73■□□□□ 0.91
CLDN20P56880 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN20P56880 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN20P56880 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN20P56880 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN20P56880 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN20P56880 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.72■□□□□ 0.91
CLDN20P56880 AC131212.1-201ENST00000613771 668 ntBASIC20.72■□□□□ 0.91
CLDN20P56880 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms