Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.01□□□□□ -0.171e-6■■■■□ 24.2
NCBP2P52298 ZBTB1-202ENST00000553583 582 ntTSL 313.82□□□□□ -0.21e-6■■■■□ 24.2
NCBP2P52298 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.291e-6■■■■□ 24.2
NCBP2P52298 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.71e-6■■■■□ 24.2
NCBP2P52298 ZBTB1-206ENST00000556965 509 ntTSL 42.33□□□□□ -2.041e-6■■■■□ 24.2
NCBP2P52298 HACE1-210ENST00000519645 859 ntTSL 521.81■■□□□ 1.089e-7■■■■□ 24.2
NCBP2P52298 SNX22-205ENST00000560945 1807 ntTSL 1 (best)21.06■□□□□ 0.969e-7■■■■□ 24.2
NCBP2P52298 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.01■□□□□ 0.799e-7■■■■□ 24.2
NCBP2P52298 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.43■□□□□ 0.79e-7■■■■□ 24.2
NCBP2P52298 CLK3-225ENST00000569063 833 ntTSL 518.58■□□□□ 0.569e-7■■■■□ 24.2
NCBP2P52298 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.519e-7■■■■□ 24.2
NCBP2P52298 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.65■□□□□ 0.429e-7■■■■□ 24.2
NCBP2P52298 SNX22-203ENST00000558466 1353 ntTSL 517.65■□□□□ 0.429e-7■■■■□ 24.2
NCBP2P52298 ALKBH1-204ENST00000557057 1750 ntTSL 316.97■□□□□ 0.319e-7■■■■□ 24.2
NCBP2P52298 HACE1-204ENST00000416605 4729 ntTSL 1 (best)16.44■□□□□ 0.229e-7■■■■□ 24.2
NCBP2P52298 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.159e-7■■■■□ 24.2
NCBP2P52298 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)15.78■□□□□ 0.129e-7■■■■□ 24.2
NCBP2P52298 CLK3-221ENST00000568139 918 ntTSL 515.75■□□□□ 0.119e-7■■■■□ 24.2
NCBP2P52298 CLK3-227ENST00000570296 916 ntTSL 515.65■□□□□ 0.19e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-211ENST00000581988 717 ntTSL 415.51■□□□□ 0.079e-7■■■■□ 24.2
NCBP2P52298 CLK3-207ENST00000562389 572 ntTSL 415.48■□□□□ 0.079e-7■■■■□ 24.2
NCBP2P52298 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.069e-7■■■■□ 24.2
NCBP2P52298 SNX22-204ENST00000560607 1182 ntTSL 215.41■□□□□ 0.069e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-208ENST00000580151 748 ntTSL 515.38■□□□□ 0.059e-7■■■■□ 24.2
NCBP2P52298 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)15.26■□□□□ 0.039e-7■■■■□ 24.2
NCBP2P52298 SNX22-207ENST00000561334 2789 ntTSL 215.01□□□□□ -0.019e-7■■■■□ 24.2
NCBP2P52298 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.95□□□□□ -0.029e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-209ENST00000580273 582 ntTSL 214.82□□□□□ -0.049e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-215ENST00000584438 569 ntTSL 414.82□□□□□ -0.049e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-206ENST00000579207 855 ntTSL 314.57□□□□□ -0.089e-7■■■■□ 24.2
NCBP2P52298 RNGTT-204ENST00000627296 2017 ntTSL 214.36□□□□□ -0.119e-7■■■■□ 24.2
NCBP2P52298 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.119e-7■■■■□ 24.2
NCBP2P52298 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.34□□□□□ -0.119e-7■■■■□ 24.2
NCBP2P52298 CLK3-217ENST00000566126 732 ntTSL 514.3□□□□□ -0.129e-7■■■■□ 24.2
NCBP2P52298 CLK3-211ENST00000563297 526 ntTSL 414.23□□□□□ -0.139e-7■■■■□ 24.2
NCBP2P52298 CLK3-223ENST00000568488 481 ntTSL 314.23□□□□□ -0.139e-7■■■■□ 24.2
NCBP2P52298 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.189e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-207ENST00000579228 568 ntTSL 313.27□□□□□ -0.299e-7■■■■□ 24.2
NCBP2P52298 CLK3-204ENST00000483723 1749 ntTSL 213.25□□□□□ -0.299e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.04□□□□□ -0.329e-7■■■■□ 24.2
NCBP2P52298 CLK3-203ENST00000454830 3787 ntTSL 513□□□□□ -0.339e-7■■■■□ 24.2
NCBP2P52298 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.359e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.399e-7■■■■□ 24.2
NCBP2P52298 SNX22-202ENST00000557789 3713 ntTSL 512.37□□□□□ -0.439e-7■■■■□ 24.2
NCBP2P52298 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.439e-7■■■■□ 24.2
NCBP2P52298 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.449e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.479e-7■■■■□ 24.2
NCBP2P52298 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.489e-7■■■■□ 24.2
NCBP2P52298 CLK3-224ENST00000568605 1047 ntTSL 212.02□□□□□ -0.499e-7■■■■□ 24.2
NCBP2P52298 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.59e-7■■■■□ 24.2
NCBP2P52298 TRMO-205ENST00000471580 426 ntTSL 311.69□□□□□ -0.549e-7■■■■□ 24.2
NCBP2P52298 TRMO-206ENST00000478126 841 ntTSL 211.45□□□□□ -0.589e-7■■■■□ 24.2
NCBP2P52298 ALKBH1-203ENST00000555100 649 ntTSL 311.41□□□□□ -0.589e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.589e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-201ENST00000320362 1651 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.749e-7■■■■□ 24.2
NCBP2P52298 TMEM147-AS1-202ENST00000588286 3911 nt10.08□□□□□ -0.89e-7■■■■□ 24.2
NCBP2P52298 SLC25A19-214ENST00000583332 693 ntTSL 510.02□□□□□ -0.819e-7■■■■□ 24.2
NCBP2P52298 TRMO-207ENST00000611338 3635 ntTSL 5 BASIC9.9□□□□□ -0.829e-7■■■■□ 24.2
NCBP2P52298 TRMO-201ENST00000375117 843 ntTSL 35.04□□□□□ -1.69e-7■■■■□ 24.2
NCBP2P52298 TRMO-204ENST00000455506 552 ntTSL 23.97□□□□□ -1.779e-7■■■■□ 24.2
NCBP2P52298 ATF6B-217ENST00000495579 1176 ntTSL 1 (best)12.89□□□□□ -0.352e-6■■■■□ 24.1
NCBP2P52298 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.462e-6■■■■□ 24.1
NCBP2P52298 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.492e-6■■■■□ 24.1
NCBP2P52298 ATF6B-212ENST00000468502 564 ntTSL 211.01□□□□□ -0.652e-6■■■■□ 24.1
NCBP2P52298 ACADM-204ENST00000473018 579 ntTSL 213.54□□□□□ -0.243e-12■■■■□ 24.1
NCBP2P52298 ACADM-215ENST00000532509 825 ntTSL 513.54□□□□□ -0.243e-12■■■■□ 24.1
NCBP2P52298 ACADM-216ENST00000534146 654 ntTSL 413.18□□□□□ -0.33e-12■■■■□ 24.1
NCBP2P52298 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.17□□□□□ -0.33e-12■■■■□ 24.1
NCBP2P52298 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.333e-12■■■■□ 24.1
NCBP2P52298 ACADM-213ENST00000530953 508 ntTSL 512.89□□□□□ -0.353e-12■■■■□ 24.1
NCBP2P52298 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.25□□□□□ -0.453e-12■■■■□ 24.1
NCBP2P52298 ACADM-207ENST00000525881 914 ntTSL 211.68□□□□□ -0.543e-12■■■■□ 24.1
NCBP2P52298 ACADM-208ENST00000526129 1536 ntTSL 211.18□□□□□ -0.623e-12■■■■□ 24.1
NCBP2P52298 ACADM-217ENST00000534334 1149 ntTSL 1 (best)7.06□□□□□ -1.283e-12■■■■□ 24.1
NCBP2P52298 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.873e-12■■■■□ 24.1
NCBP2P52298 ACADM-206ENST00000525808 1422 ntTSL 23.27□□□□□ -1.893e-12■■■■□ 24.1
NCBP2P52298 ACADM-209ENST00000526196 1451 ntTSL 1 (best)3.17□□□□□ -1.93e-12■■■■□ 24.1
NCBP2P52298 NEU4-210ENST00000428592 505 ntTSL 415.41■□□□□ 0.067e-8■■■■□ 24.1
NCBP2P52298 DNAJA3-210ENST00000574895 558 ntTSL 420.57■□□□□ 0.882e-8■■■■□ 24
NCBP2P52298 DNAJA3-211ENST00000575106 837 ntTSL 420.27■□□□□ 0.842e-8■■■■□ 24
NCBP2P52298 DNAJA3-204ENST00000570857 554 ntTSL 320.27■□□□□ 0.842e-8■■■■□ 24
NCBP2P52298 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.26■□□□□ 0.352e-8■■■■□ 24
NCBP2P52298 DNAJA3-213ENST00000576911 1413 ntTSL 217.22■□□□□ 0.352e-8■■■■□ 24
NCBP2P52298 DNAJA3-207ENST00000572974 495 ntTSL 417.21■□□□□ 0.352e-8■■■■□ 24
NCBP2P52298 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.142e-8■■■■□ 24
NCBP2P52298 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.112e-8■■■■□ 24
NCBP2P52298 RPL37A-207ENST00000478153 2082 ntTSL 1 (best)20.54■□□□□ 0.888e-21■■■■□ 24
NCBP2P52298 RPL37A-201ENST00000359681 742 ntTSL 1 (best)16.37■□□□□ 0.218e-21■■■■□ 24
NCBP2P52298 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC10.89□□□□□ -0.678e-21■■■■□ 24
NCBP2P52298 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC10.47□□□□□ -0.738e-21■■■■□ 24
NCBP2P52298 RPL37A-202ENST00000420712 385 ntTSL 58.88□□□□□ -0.998e-21■■■■□ 24
NCBP2P52298 RPL37A-208ENST00000487233 2225 ntTSL 28.49□□□□□ -1.058e-21■■■■□ 24
NCBP2P52298 RPL37A-209ENST00000490649 1701 ntTSL 1 (best)7.96□□□□□ -1.148e-21■■■■□ 24
NCBP2P52298 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.498e-21■■■■□ 24
NCBP2P52298 MARK3-219ENST00000559328 533 ntTSL 419.13■□□□□ 0.655e-12■■■■□ 24
NCBP2P52298 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.05■□□□□ 0.645e-12■■■■□ 24
NCBP2P52298 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.95□□□□□ -0.025e-12■■■■□ 24
NCBP2P52298 MARK3-221ENST00000560603 572 ntTSL 410.78□□□□□ -0.685e-12■■■■□ 24
NCBP2P52298 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.49■□□□□ 0.711e-48■■■■□ 24
NCBP2P52298 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)16.96■□□□□ 0.311e-48■■■■□ 24
Retrieved 100 of 18,329 protein–RNA pairs in 189.3 ms