Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CXCL12P48061 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CXCL12P48061 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CXCL12P48061 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CXCL12P48061 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CXCL12P48061 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
CXCL12P48061 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.98■■□□□ 1.27
CXCL12P48061 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.98■■□□□ 1.27
CXCL12P48061 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CXCL12P48061 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.97■■□□□ 1.27
CXCL12P48061 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.97■■□□□ 1.27
CXCL12P48061 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.97■■□□□ 1.27
CXCL12P48061 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CXCL12P48061 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.97■■□□□ 1.27
CXCL12P48061 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CXCL12P48061 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.96■■□□□ 1.27
CXCL12P48061 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.96■■□□□ 1.27
CXCL12P48061 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L2-201ENST00000561772 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.96■■□□□ 1.27
CXCL12P48061 AC092437.1-201ENST00000624794 1048 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L6-201ENST00000626483 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L1-201ENST00000627662 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L8-201ENST00000629013 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L3-201ENST00000630187 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L7-201ENST00000630678 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 DUX4L5-201ENST00000630834 1275 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 TSPY26P-201ENST00000476365 1326 ntBASIC22.96■■□□□ 1.27
CXCL12P48061 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.96■■□□□ 1.27
CXCL12P48061 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.96■■□□□ 1.27
CXCL12P48061 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CXCL12P48061 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.27
CXCL12P48061 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CXCL12P48061 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CXCL12P48061 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CXCL12P48061 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
CXCL12P48061 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CXCL12P48061 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CXCL12P48061 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.95■■□□□ 1.26
CXCL12P48061 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.95■■□□□ 1.26
CXCL12P48061 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.95■■□□□ 1.26
CXCL12P48061 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.94■■□□□ 1.26
CXCL12P48061 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CXCL12P48061 pRNA.6-201ENST00000610482 90 ntBASIC22.94■■□□□ 1.26
CXCL12P48061 pRNA.5-201ENST00000612139 90 ntBASIC22.94■■□□□ 1.26
CXCL12P48061 pRNA.11-201ENST00000618423 90 ntBASIC22.94■■□□□ 1.26
CXCL12P48061 pRNA.13-201ENST00000619112 90 ntBASIC22.94■■□□□ 1.26
CXCL12P48061 AL358852.1-201ENST00000623174 1268 ntBASIC22.94■■□□□ 1.26
CXCL12P48061 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.93■■□□□ 1.26
CXCL12P48061 AC123595.1-201ENST00000440769 1046 ntBASIC22.93■■□□□ 1.26
CXCL12P48061 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.93■■□□□ 1.26
CXCL12P48061 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
CXCL12P48061 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.93■■□□□ 1.26
CXCL12P48061 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CXCL12P48061 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CXCL12P48061 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CXCL12P48061 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.93■■□□□ 1.26
CXCL12P48061 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CXCL12P48061 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.93■■□□□ 1.26
CXCL12P48061 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.92■■□□□ 1.26
CXCL12P48061 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CXCL12P48061 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.92■■□□□ 1.26
CXCL12P48061 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CXCL12P48061 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CXCL12P48061 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
CXCL12P48061 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CXCL12P48061 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.92■■□□□ 1.26
CXCL12P48061 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.92■■□□□ 1.26
CXCL12P48061 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.92■■□□□ 1.26
CXCL12P48061 AC004911.1-201ENST00000416316 871 ntBASIC22.92■■□□□ 1.26
CXCL12P48061 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CXCL12P48061 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.92■■□□□ 1.26
CXCL12P48061 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.92■■□□□ 1.26
CXCL12P48061 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.92■■□□□ 1.26
CXCL12P48061 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CXCL12P48061 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CXCL12P48061 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.91■■□□□ 1.26
CXCL12P48061 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.91■■□□□ 1.26
CXCL12P48061 AC027612.3-201ENST00000413684 1047 ntBASIC22.91■■□□□ 1.26
CXCL12P48061 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.91■■□□□ 1.26
CXCL12P48061 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.91■■□□□ 1.26
CXCL12P48061 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CXCL12P48061 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.91■■□□□ 1.26
CXCL12P48061 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.9■■□□□ 1.26
CXCL12P48061 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CXCL12P48061 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.9■■□□□ 1.26
CXCL12P48061 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CXCL12P48061 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CXCL12P48061 ID1-201ENST00000376105 1233 ntBASIC22.9■■□□□ 1.26
CXCL12P48061 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CXCL12P48061 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.9■■□□□ 1.26
CXCL12P48061 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
CXCL12P48061 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CXCL12P48061 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CXCL12P48061 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CXCL12P48061 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CXCL12P48061 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.9■■□□□ 1.26
CXCL12P48061 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CXCL12P48061 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms