Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.7■■□□□ 1.06
SSR2P43308 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.7■■□□□ 1.06
SSR2P43308 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.7■■□□□ 1.06
SSR2P43308 MIR4787-201ENST00000607364 84 ntBASIC21.7■■□□□ 1.06
SSR2P43308 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.7■■□□□ 1.06
SSR2P43308 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SSR2P43308 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SSR2P43308 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.7■■□□□ 1.06
SSR2P43308 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.69■■□□□ 1.06
SSR2P43308 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.69■■□□□ 1.06
SSR2P43308 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.69■■□□□ 1.06
SSR2P43308 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.69■■□□□ 1.06
SSR2P43308 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SSR2P43308 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SSR2P43308 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR2P43308 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR2P43308 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.68■■□□□ 1.06
SSR2P43308 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR2P43308 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.68■■□□□ 1.06
SSR2P43308 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.68■■□□□ 1.06
SSR2P43308 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR2P43308 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SSR2P43308 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.68■■□□□ 1.06
SSR2P43308 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
SSR2P43308 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SSR2P43308 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.67■■□□□ 1.06
SSR2P43308 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SSR2P43308 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
SSR2P43308 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.67■■□□□ 1.06
SSR2P43308 AC092028.1-203ENST00000608262 953 ntBASIC21.67■■□□□ 1.06
SSR2P43308 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.67■■□□□ 1.06
SSR2P43308 AL035685.1-201ENST00000636663 812 ntBASIC21.67■■□□□ 1.06
SSR2P43308 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SSR2P43308 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR2P43308 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSR2P43308 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SSR2P43308 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SSR2P43308 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR2P43308 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR2P43308 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SSR2P43308 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR2P43308 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR2P43308 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR2P43308 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR2P43308 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.65■■□□□ 1.06
SSR2P43308 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
SSR2P43308 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR2P43308 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.65■■□□□ 1.06
SSR2P43308 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SSR2P43308 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SSR2P43308 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR2P43308 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
SSR2P43308 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSR2P43308 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.64■■□□□ 1.05
SSR2P43308 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SSR2P43308 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.64■■□□□ 1.05
SSR2P43308 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.64■■□□□ 1.05
SSR2P43308 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR2P43308 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSR2P43308 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR2P43308 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SSR2P43308 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR2P43308 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SSR2P43308 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
SSR2P43308 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.63■■□□□ 1.05
SSR2P43308 MTDHP2-201ENST00000601468 714 ntBASIC21.63■■□□□ 1.05
SSR2P43308 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR2P43308 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR2P43308 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR2P43308 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.62■■□□□ 1.05
SSR2P43308 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SSR2P43308 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR2P43308 TSPY9P-201ENST00000440215 945 ntBASIC21.62■■□□□ 1.05
SSR2P43308 TSPY11P-201ENST00000442607 1045 ntBASIC21.62■■□□□ 1.05
SSR2P43308 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.62■■□□□ 1.05
SSR2P43308 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms