Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 JJJ3YJR097W 519 nt4.15□□□□□ -1.75
CUP9P41817 UBI4YLL039C 1146 nt4.15□□□□□ -1.75
CUP9P41817 NMD4YLR363C 657 nt4.15□□□□□ -1.75
CUP9P41817 ICY2YPL250C 411 nt4.15□□□□□ -1.75
CUP9P41817 NOP7YGR103W 1818 nt4.15□□□□□ -1.75
CUP9P41817 PXA1YPL147W 2613 nt4.14□□□□□ -1.75
CUP9P41817 AXL2YIL140W 2472 nt4.14□□□□□ -1.75
CUP9P41817 YDL012CYDL012C 324 nt4.14□□□□□ -1.75
CUP9P41817 SFK1YKL051W 1062 nt4.14□□□□□ -1.75
CUP9P41817 GSP2YOR185C 663 nt4.14□□□□□ -1.75
CUP9P41817 YPR109WYPR109W 885 nt4.14□□□□□ -1.75
CUP9P41817 KRE6YPR159W 2163 nt4.13□□□□□ -1.75
CUP9P41817 CPR4YCR069W 957 nt4.13□□□□□ -1.75
CUP9P41817 LHP1YDL051W 828 nt4.13□□□□□ -1.75
CUP9P41817 YEL067CYEL067C 588 nt4.13□□□□□ -1.75
CUP9P41817 SUT1YGL162W 900 nt4.13□□□□□ -1.75
CUP9P41817 YGR066CYGR066C 879 nt4.13□□□□□ -1.75
CUP9P41817 YBL010CYBL010C 843 nt4.13□□□□□ -1.75
CUP9P41817 YNG1YOR064C 660 nt4.13□□□□□ -1.75
CUP9P41817 YBR126W-AYBR126W-A 207 nt4.13□□□□□ -1.75
CUP9P41817 PEX32YBR168W 1242 nt4.13□□□□□ -1.75
CUP9P41817 APL6YGR261C 2430 nt4.13□□□□□ -1.75
CUP9P41817 ADE6YGR061C 4077 nt4.12□□□□□ -1.75
CUP9P41817 MKC7YDR144C 1791 nt4.12□□□□□ -1.75
CUP9P41817 RRB1YMR131C 1536 nt4.12□□□□□ -1.75
CUP9P41817 RXT3YDL076C 885 nt4.12□□□□□ -1.75
CUP9P41817 COG1YGL223C 1254 nt4.12□□□□□ -1.75
CUP9P41817 ORM1YGR038W 669 nt4.12□□□□□ -1.75
CUP9P41817 YKL023WYKL023W 834 nt4.12□□□□□ -1.75
CUP9P41817 RRN9YMR270C 1098 nt4.12□□□□□ -1.75
CUP9P41817 GPR1YDL035C 2886 nt4.12□□□□□ -1.75
CUP9P41817 ALG6YOR002W 1635 nt4.12□□□□□ -1.75
CUP9P41817 MNT2YGL257C 1677 nt4.12□□□□□ -1.75
CUP9P41817 GAD1YMR250W 1758 nt4.12□□□□□ -1.75
CUP9P41817 YTA6YPL074W 2265 nt4.11□□□□□ -1.75
CUP9P41817 YHR214WYHR214W 612 nt4.11□□□□□ -1.75
CUP9P41817 YJU2YKL095W 837 nt4.11□□□□□ -1.75
CUP9P41817 YAR066WYAR066W 612 nt4.11□□□□□ -1.75
CUP9P41817 YPL278CYPL278C 303 nt4.11□□□□□ -1.75
CUP9P41817 YCL012CYCL012C 405 nt4.11□□□□□ -1.75
CUP9P41817 DBF2YGR092W 1719 nt4.11□□□□□ -1.75
CUP9P41817 PRP43YGL120C 2304 nt4.11□□□□□ -1.75
CUP9P41817 YNL247WYNL247W 2304 nt4.11□□□□□ -1.75
CUP9P41817 SAP4YGL229C 2457 nt4.11□□□□□ -1.75
CUP9P41817 FRS1YLR060W 1788 nt4.1□□□□□ -1.75
CUP9P41817 KGD1YIL125W 3045 nt4.1□□□□□ -1.75
CUP9P41817 MAK3YPR051W 531 nt4.1□□□□□ -1.75
CUP9P41817 VHS2YIL135C 1311 nt4.1□□□□□ -1.75
CUP9P41817 WTM1YOR230W 1314 nt4.1□□□□□ -1.75
CUP9P41817 RVB1YDR190C 1392 nt4.1□□□□□ -1.75
CUP9P41817 AIM17YHL021C 1398 nt4.1□□□□□ -1.75
CUP9P41817 DIT2YDR402C 1470 nt4.1□□□□□ -1.75
CUP9P41817 SSB2YNL209W 1842 nt4.09□□□□□ -1.75
CUP9P41817 LUC7YDL087C 786 nt4.09□□□□□ -1.75
CUP9P41817 tS(AGA)D3tS(AGA)D3 83 nt4.09□□□□□ -1.75
CUP9P41817 YIL165CYIL165C 360 nt4.09□□□□□ -1.75
CUP9P41817 RFC2YJR068W 1062 nt4.09□□□□□ -1.75
CUP9P41817 PUS5YLR165C 765 nt4.09□□□□□ -1.75
CUP9P41817 YTH1YPR107C 627 nt4.09□□□□□ -1.75
CUP9P41817 MSC7YHR039C 1935 nt4.09□□□□□ -1.76
CUP9P41817 MSS116YDR194C 1995 nt4.09□□□□□ -1.76
CUP9P41817 SFI1YLL003W 2841 nt4.08□□□□□ -1.76
CUP9P41817 MBP1YDL056W 2502 nt4.08□□□□□ -1.76
CUP9P41817 SNA2YDR525W-A 240 nt4.08□□□□□ -1.76
CUP9P41817 KRE28YDR532C 1158 nt4.08□□□□□ -1.76
CUP9P41817 YER145C-AYER145C-A 438 nt4.08□□□□□ -1.76
CUP9P41817 SPC34YKR037C 888 nt4.08□□□□□ -1.76
CUP9P41817 ECM7YLR443W 1347 nt4.08□□□□□ -1.76
CUP9P41817 GAS3YMR215W 1575 nt4.08□□□□□ -1.76
CUP9P41817 RTC5YOR118W 1704 nt4.08□□□□□ -1.76
CUP9P41817 GRE1YPL223C 507 nt4.08□□□□□ -1.76
CUP9P41817 YPL245WYPL245W 1365 nt4.08□□□□□ -1.76
CUP9P41817 PMA1YGL008C 2757 nt4.08□□□□□ -1.76
CUP9P41817 AZR1YGR224W 1842 nt4.07□□□□□ -1.76
CUP9P41817 LYP1YNL268W 1836 nt4.07□□□□□ -1.76
CUP9P41817 PAP1YKR002W 1707 nt4.07□□□□□ -1.76
CUP9P41817 SRG1SRG1 551 nt4.07□□□□□ -1.76
CUP9P41817 COA3YJL062W-A 258 nt4.07□□□□□ -1.76
CUP9P41817 YNL181WYNL181W 1224 nt4.07□□□□□ -1.76
CUP9P41817 GSY1YFR015C 2127 nt4.07□□□□□ -1.76
CUP9P41817 FHL1YPR104C 2811 nt4.07□□□□□ -1.76
CUP9P41817 HPC2YBR215W 1878 nt4.07□□□□□ -1.76
CUP9P41817 RCK2YLR248W 1833 nt4.07□□□□□ -1.76
CUP9P41817 VID22YLR373C 2706 nt4.07□□□□□ -1.76
CUP9P41817 FRT2YAL028W 1587 nt4.06□□□□□ -1.76
CUP9P41817 STB3YDR169C 1542 nt4.06□□□□□ -1.76
CUP9P41817 HOF1YMR032W 2010 nt4.06□□□□□ -1.76
CUP9P41817 ARG82YDR173C 1068 nt4.06□□□□□ -1.76
CUP9P41817 RPL12AYEL054C 498 nt4.06□□□□□ -1.76
CUP9P41817 YLR346CYLR346C 306 nt4.06□□□□□ -1.76
CUP9P41817 YMR135W-AYMR135W-A 534 nt4.06□□□□□ -1.76
CUP9P41817 NMD3YHR170W 1557 nt4.06□□□□□ -1.76
CUP9P41817 CAF4YKR036C 1932 nt4.05□□□□□ -1.76
CUP9P41817 DCD1YHR144C 939 nt4.05□□□□□ -1.76
CUP9P41817 YGR125WYGR125W 3111 nt4.05□□□□□ -1.76
CUP9P41817 YFT2YDR319C 825 nt4.04□□□□□ -1.76
CUP9P41817 tL(UAG)JtL(UAG)J 82 nt4.04□□□□□ -1.76
CUP9P41817 tL(UAG)L1tL(UAG)L1 82 nt4.04□□□□□ -1.76
CUP9P41817 tL(UAG)L2tL(UAG)L2 82 nt4.04□□□□□ -1.76
CUP9P41817 ISY1YJR050W 708 nt4.04□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 75.7 ms