Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YCR075W-AYCR075W-A 228 nt4.7□□□□□ -1.66
TDA11P38854 SEH1YGL100W 1050 nt4.7□□□□□ -1.66
TDA11P38854 YNL296WYNL296W 315 nt4.7□□□□□ -1.66
TDA11P38854 SER1YOR184W 1188 nt4.7□□□□□ -1.66
TDA11P38854 YCR006CYCR006C 474 nt4.69□□□□□ -1.66
TDA11P38854 EAF5YEL018W 840 nt4.69□□□□□ -1.66
TDA11P38854 YHL034W-AYHL034W-A 462 nt4.69□□□□□ -1.66
TDA11P38854 NHP6AYPR052C 282 nt4.69□□□□□ -1.66
TDA11P38854 MSC7YHR039C 1935 nt4.69□□□□□ -1.66
TDA11P38854 MTC1YJL123C 1437 nt4.69□□□□□ -1.66
TDA11P38854 CTT1YGR088W 1689 nt4.68□□□□□ -1.66
TDA11P38854 URA3YEL021W 804 nt4.68□□□□□ -1.66
TDA11P38854 CBP3YPL215W 1008 nt4.68□□□□□ -1.66
TDA11P38854 TAF5YBR198C 2397 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)CtK(CUU)C 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)D1tK(CUU)D1 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)D2tK(CUU)D2 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)E1tK(CUU)E1 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)E2tK(CUU)E2 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)FtK(CUU)F 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)G1tK(CUU)G1 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)G2tK(CUU)G2 73 nt4.67□□□□□ -1.66
TDA11P38854 SCS2YER120W 735 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)G3tK(CUU)G3 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)ItK(CUU)I 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)JtK(CUU)J 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)KtK(CUU)K 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)MtK(CUU)M 73 nt4.67□□□□□ -1.66
TDA11P38854 tK(CUU)PtK(CUU)P 73 nt4.67□□□□□ -1.66
TDA11P38854 YGR016WYGR016W 573 nt4.67□□□□□ -1.66
TDA11P38854 POP4YBR257W 840 nt4.67□□□□□ -1.66
TDA11P38854 DOA1YKL213C 2148 nt4.67□□□□□ -1.66
TDA11P38854 VAC7YNL054W 3498 nt4.67□□□□□ -1.66
TDA11P38854 TRM44YPL030W 1704 nt4.66□□□□□ -1.66
TDA11P38854 YAP1YML007W 1953 nt4.66□□□□□ -1.66
TDA11P38854 YJR012CYJR012C 624 nt4.66□□□□□ -1.66
TDA11P38854 TVP38YKR088C 1014 nt4.66□□□□□ -1.66
TDA11P38854 SKG1YKR100C 1068 nt4.66□□□□□ -1.66
TDA11P38854 GPI12YMR281W 915 nt4.66□□□□□ -1.66
TDA11P38854 SKG6YHR149C 2205 nt4.66□□□□□ -1.66
TDA11P38854 FAA3YIL009W 2085 nt4.65□□□□□ -1.66
TDA11P38854 UPC2YDR213W 2742 nt4.65□□□□□ -1.66
TDA11P38854 GSY1YFR015C 2127 nt4.65□□□□□ -1.67
TDA11P38854 SUT1YGL162W 900 nt4.65□□□□□ -1.67
TDA11P38854 PAH1YMR165C 2589 nt4.64□□□□□ -1.67
TDA11P38854 LCB2YDR062W 1686 nt4.64□□□□□ -1.67
TDA11P38854 NUP2YLR335W 2163 nt4.64□□□□□ -1.67
TDA11P38854 YFR034W-AYFR034W-A 288 nt4.64□□□□□ -1.67
TDA11P38854 RPN12YFR052W 825 nt4.64□□□□□ -1.67
TDA11P38854 BUD28YLR062C 378 nt4.64□□□□□ -1.67
TDA11P38854 RPC19YNL113W 429 nt4.64□□□□□ -1.67
TDA11P38854 YOR342CYOR342C 960 nt4.64□□□□□ -1.67
TDA11P38854 ARN2YHL047C 1863 nt4.64□□□□□ -1.67
TDA11P38854 DBF2YGR092W 1719 nt4.63□□□□□ -1.67
TDA11P38854 YOL153CYOL153C 1746 nt4.63□□□□□ -1.67
TDA11P38854 MMT2YPL224C 1455 nt4.63□□□□□ -1.67
TDA11P38854 HNT2YDR305C 654 nt4.63□□□□□ -1.67
TDA11P38854 RIP1YEL024W 648 nt4.63□□□□□ -1.67
TDA11P38854 JAC1YGL018C 555 nt4.63□□□□□ -1.67
TDA11P38854 MAC1YMR021C 1254 nt4.63□□□□□ -1.67
TDA11P38854 YBR016WYBR016W 387 nt4.63□□□□□ -1.67
TDA11P38854 TOG1YER184C 2385 nt4.63□□□□□ -1.67
TDA11P38854 SUP35YDR172W 2058 nt4.63□□□□□ -1.67
TDA11P38854 MSE1YOL033W 1611 nt4.62□□□□□ -1.67
TDA11P38854 GDE1YPL110C 3672 nt4.62□□□□□ -1.67
TDA11P38854 EAR1YMR171C 1653 nt4.62□□□□□ -1.67
TDA11P38854 YIL021C-AYIL021C-A 270 nt4.62□□□□□ -1.67
TDA11P38854 MRPL4YLR439W 960 nt4.62□□□□□ -1.67
TDA11P38854 PRE7YBL041W 726 nt4.62□□□□□ -1.67
TDA11P38854 MDG1YNL173C 1101 nt4.62□□□□□ -1.67
TDA11P38854 HXT4YHR092C 1731 nt4.62□□□□□ -1.67
TDA11P38854 COT1YOR316C 1320 nt4.62□□□□□ -1.67
TDA11P38854 GCR2YNL199C 1605 nt4.61□□□□□ -1.67
TDA11P38854 SIS2YKR072C 1689 nt4.61□□□□□ -1.67
TDA11P38854 YER158CYER158C 1722 nt4.61□□□□□ -1.67
TDA11P38854 YJL218WYJL218W 591 nt4.61□□□□□ -1.67
TDA11P38854 ECM1YAL059W 639 nt4.61□□□□□ -1.67
TDA11P38854 ECM15YBL001C 315 nt4.61□□□□□ -1.67
TDA11P38854 PSY4YBL046W 1326 nt4.61□□□□□ -1.67
TDA11P38854 MEC3YLR288C 1425 nt4.61□□□□□ -1.67
TDA11P38854 FAP1YNL023C 2898 nt4.61□□□□□ -1.67
TDA11P38854 UGA2YBR006W 1494 nt4.61□□□□□ -1.67
TDA11P38854 PXA1YPL147W 2613 nt4.6□□□□□ -1.67
TDA11P38854 IMA3YIL172C 1770 nt4.6□□□□□ -1.67
TDA11P38854 IMA4YJL221C 1770 nt4.6□□□□□ -1.67
TDA11P38854 FRE7YOL152W 1863 nt4.6□□□□□ -1.67
TDA11P38854 SPT3YDR392W 1014 nt4.6□□□□□ -1.67
TDA11P38854 RPN5YDL147W 1338 nt4.6□□□□□ -1.67
TDA11P38854 XKS1YGR194C 1803 nt4.6□□□□□ -1.67
TDA11P38854 SYP1YCR030C 2613 nt4.59□□□□□ -1.67
TDA11P38854 RAD28YDR030C 1521 nt4.59□□□□□ -1.67
TDA11P38854 MNN10YDR245W 1182 nt4.59□□□□□ -1.67
TDA11P38854 YDR545C-AYDR545C-A 480 nt4.59□□□□□ -1.67
TDA11P38854 YEL053W-AYEL053W-A 348 nt4.59□□□□□ -1.67
TDA11P38854 YEL077W-AYEL077W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 GLE2YER107C 1098 nt4.59□□□□□ -1.67
TDA11P38854 YER190C-BYER190C-B 483 nt4.59□□□□□ -1.67
TDA11P38854 TUB2YFL037W 1374 nt4.59□□□□□ -1.67
TDA11P38854 YFL068WYFL068W 483 nt4.59□□□□□ -1.67
TDA11P38854 YGR296C-BYGR296C-B 483 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms