Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX6P35712 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX6P35712 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX6P35712 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
SOX6P35712 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX6P35712 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX6P35712 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SOX6P35712 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SOX6P35712 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SOX6P35712 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX6P35712 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX6P35712 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX6P35712 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX6P35712 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 AL359258.2-201ENST00000564063 1566 ntBASIC20.35■□□□□ 0.85
SOX6P35712 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX6P35712 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SOX6P35712 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SOX6P35712 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX6P35712 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX6P35712 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SOX6P35712 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SOX6P35712 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX6P35712 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX6P35712 AC092068.2-201ENST00000590491 1708 ntBASIC20.33■□□□□ 0.85
SOX6P35712 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SOX6P35712 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX6P35712 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX6P35712 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.33■□□□□ 0.85
SOX6P35712 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.33■□□□□ 0.85
SOX6P35712 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SOX6P35712 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
SOX6P35712 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX6P35712 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX6P35712 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SOX6P35712 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX6P35712 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX6P35712 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.32■□□□□ 0.84
SOX6P35712 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX6P35712 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SOX6P35712 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.32■□□□□ 0.84
SOX6P35712 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX6P35712 MIR7108-201ENST00000614319 87 ntBASIC20.32■□□□□ 0.84
SOX6P35712 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX6P35712 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SOX6P35712 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.32■□□□□ 0.84
SOX6P35712 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SOX6P35712 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.31■□□□□ 0.84
SOX6P35712 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.31■□□□□ 0.84
SOX6P35712 DUX4L11-201ENST00000611504 1267 ntBASIC20.31■□□□□ 0.84
SOX6P35712 DUX4L12-201ENST00000614593 1267 ntBASIC20.31■□□□□ 0.84
SOX6P35712 DUX4L14-201ENST00000621227 1267 ntBASIC20.31■□□□□ 0.84
SOX6P35712 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SOX6P35712 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SOX6P35712 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX6P35712 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX6P35712 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX6P35712 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SOX6P35712 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SOX6P35712 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.3■□□□□ 0.84
SOX6P35712 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SOX6P35712 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
SOX6P35712 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.29■□□□□ 0.84
SOX6P35712 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SOX6P35712 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.29■□□□□ 0.84
SOX6P35712 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SOX6P35712 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SOX6P35712 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SOX6P35712 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SOX6P35712 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SOX6P35712 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms