Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.02■□□□□ 0.96
LCN1P31025 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LCN1P31025 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LCN1P31025 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LCN1P31025 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.01■□□□□ 0.95
LCN1P31025 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LCN1P31025 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LCN1P31025 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 AC092028.1-203ENST00000608262 953 ntBASIC21.01■□□□□ 0.95
LCN1P31025 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.01■□□□□ 0.95
LCN1P31025 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LCN1P31025 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
LCN1P31025 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LCN1P31025 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LCN1P31025 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LCN1P31025 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LCN1P31025 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LCN1P31025 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 AC133561.1-201ENST00000568600 2415 ntBASIC20.99■□□□□ 0.95
LCN1P31025 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
LCN1P31025 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LCN1P31025 MIR4787-201ENST00000607364 84 ntBASIC20.99■□□□□ 0.95
LCN1P31025 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.99■□□□□ 0.95
LCN1P31025 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCN1P31025 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LCN1P31025 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LCN1P31025 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.98■□□□□ 0.95
LCN1P31025 AC239859.2-201ENST00000444165 318 ntBASIC20.98■□□□□ 0.95
LCN1P31025 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.98■□□□□ 0.95
LCN1P31025 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.98■□□□□ 0.95
LCN1P31025 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
LCN1P31025 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCN1P31025 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
LCN1P31025 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.97■□□□□ 0.95
LCN1P31025 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P31025 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P31025 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.97■□□□□ 0.95
LCN1P31025 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LCN1P31025 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P31025 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.97■□□□□ 0.95
LCN1P31025 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCN1P31025 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P31025 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.96■□□□□ 0.95
LCN1P31025 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P31025 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.96■□□□□ 0.95
LCN1P31025 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.96■□□□□ 0.95
LCN1P31025 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P31025 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LCN1P31025 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P31025 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.96■□□□□ 0.95
LCN1P31025 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.96■□□□□ 0.95
LCN1P31025 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCN1P31025 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
LCN1P31025 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.95■□□□□ 0.94
LCN1P31025 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LCN1P31025 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.95■□□□□ 0.94
LCN1P31025 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.95■□□□□ 0.94
LCN1P31025 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 AL035685.1-201ENST00000636663 812 ntBASIC20.95■□□□□ 0.94
LCN1P31025 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCN1P31025 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCN1P31025 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms