Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ABCD3P28288 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCD3P28288 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ABCD3P28288 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCD3P28288 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ABCD3P28288 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.02■□□□□ 0.96
ABCD3P28288 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.02■□□□□ 0.96
ABCD3P28288 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCD3P28288 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCD3P28288 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ABCD3P28288 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 AC093323.1-202ENST00000635031 2045 ntBASIC21.01■□□□□ 0.95
ABCD3P28288 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 ABCB10P4-201ENST00000566803 2184 ntBASIC21.01■□□□□ 0.95
ABCD3P28288 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.01■□□□□ 0.95
ABCD3P28288 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ABCD3P28288 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCD3P28288 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCD3P28288 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21■□□□□ 0.95
ABCD3P28288 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21■□□□□ 0.95
ABCD3P28288 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21■□□□□ 0.95
ABCD3P28288 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21■□□□□ 0.95
ABCD3P28288 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ABCD3P28288 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ABCD3P28288 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCD3P28288 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.99■□□□□ 0.95
ABCD3P28288 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ABCD3P28288 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.99■□□□□ 0.95
ABCD3P28288 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.99■□□□□ 0.95
ABCD3P28288 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.99■□□□□ 0.95
ABCD3P28288 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.99■□□□□ 0.95
ABCD3P28288 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ABCD3P28288 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.98■□□□□ 0.95
ABCD3P28288 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCD3P28288 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
ABCD3P28288 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCD3P28288 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.98■□□□□ 0.95
ABCD3P28288 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCD3P28288 AC131212.1-201ENST00000613771 668 ntBASIC20.98■□□□□ 0.95
ABCD3P28288 AL117332.1-201ENST00000622628 974 ntBASIC20.98■□□□□ 0.95
ABCD3P28288 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ABCD3P28288 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCD3P28288 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ABCD3P28288 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ABCD3P28288 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ABCD3P28288 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ABCD3P28288 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.97■□□□□ 0.95
ABCD3P28288 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCD3P28288 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.97■□□□□ 0.95
ABCD3P28288 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.97■□□□□ 0.95
ABCD3P28288 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCD3P28288 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ABCD3P28288 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.97■□□□□ 0.95
ABCD3P28288 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ABCD3P28288 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ABCD3P28288 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCD3P28288 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCD3P28288 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCD3P28288 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCD3P28288 MIR3621-201ENST00000580529 85 ntBASIC20.96■□□□□ 0.95
ABCD3P28288 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.96■□□□□ 0.95
ABCD3P28288 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCD3P28288 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCD3P28288 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCD3P28288 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ABCD3P28288 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.95■□□□□ 0.95
ABCD3P28288 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.95■□□□□ 0.94
ABCD3P28288 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ABCD3P28288 AL356740.2-201ENST00000601559 647 ntBASIC20.95■□□□□ 0.94
ABCD3P28288 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCD3P28288 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCD3P28288 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ABCD3P28288 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCD3P28288 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCD3P28288 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ABCD3P28288 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ABCD3P28288 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCD3P28288 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCD3P28288 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
ABCD3P28288 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCD3P28288 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCD3P28288 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCD3P28288 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCD3P28288 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.93■□□□□ 0.94
ABCD3P28288 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.93■□□□□ 0.94
ABCD3P28288 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.93■□□□□ 0.94
ABCD3P28288 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms