Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RPL28YGL103W 450 nt5.5□□□□□ -1.53
MSH1P25846 MRP17YKL003C 396 nt5.5□□□□□ -1.53
MSH1P25846 MRT4YKL009W 711 nt5.5□□□□□ -1.53
MSH1P25846 YLR036CYLR036C 612 nt5.5□□□□□ -1.53
MSH1P25846 MRP21YBL090W 534 nt5.5□□□□□ -1.53
MSH1P25846 MSH1YHR120W 2880 nt5.5□□□□□ -1.53
MSH1P25846 THI22YPR121W 1719 nt5.5□□□□□ -1.53
MSH1P25846 UBA2YDR390C 1911 nt5.5□□□□□ -1.53
MSH1P25846 TUP1YCR084C 2142 nt5.5□□□□□ -1.53
MSH1P25846 ATG20YDL113C 1923 nt5.49□□□□□ -1.53
MSH1P25846 ERD1YDR414C 1089 nt5.49□□□□□ -1.53
MSH1P25846 NPY1YGL067W 1155 nt5.49□□□□□ -1.53
MSH1P25846 CIA2YHR122W 696 nt5.49□□□□□ -1.53
MSH1P25846 PRP45YAL032C 1140 nt5.49□□□□□ -1.53
MSH1P25846 YLR412C-AYLR412C-A 207 nt5.49□□□□□ -1.53
MSH1P25846 SFT2YBL102W 648 nt5.49□□□□□ -1.53
MSH1P25846 QCR2YPR191W 1107 nt5.49□□□□□ -1.53
MSH1P25846 GEP3YOR205C 1671 nt5.49□□□□□ -1.53
MSH1P25846 CRT10YOL063C 2874 nt5.49□□□□□ -1.53
MSH1P25846 TFC7YOR110W 1308 nt5.48□□□□□ -1.53
MSH1P25846 ADE6YGR061C 4077 nt5.48□□□□□ -1.53
MSH1P25846 EKI1YDR147W 1605 nt5.48□□□□□ -1.53
MSH1P25846 HXT4YHR092C 1731 nt5.48□□□□□ -1.53
MSH1P25846 PRR1YKL116C 1557 nt5.48□□□□□ -1.53
MSH1P25846 ULA1YPL003W 1389 nt5.48□□□□□ -1.53
MSH1P25846 UBC1YDR177W 648 nt5.48□□□□□ -1.53
MSH1P25846 YHR212W-AYHR212W-A 204 nt5.48□□□□□ -1.53
MSH1P25846 YAR061WYAR061W 204 nt5.48□□□□□ -1.53
MSH1P25846 PIN2YOR104W 849 nt5.48□□□□□ -1.53
MSH1P25846 ARR3YPR201W 1215 nt5.48□□□□□ -1.53
MSH1P25846 COQ6YGR255C 1440 nt5.48□□□□□ -1.53
MSH1P25846 tN(GUU)CtN(GUU)C 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)FtN(GUU)F 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)GtN(GUU)G 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)KtN(GUU)K 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)LtN(GUU)L 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)N1tN(GUU)N1 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)N2tN(GUU)N2 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)O1tN(GUU)O1 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)O2tN(GUU)O2 74 nt5.47□□□□□ -1.53
MSH1P25846 tN(GUU)PtN(GUU)P 74 nt5.47□□□□□ -1.53
MSH1P25846 YHR137C-AYHR137C-A 651 nt5.47□□□□□ -1.53
MSH1P25846 PGU1YJR153W 1086 nt5.47□□□□□ -1.53
MSH1P25846 YKR047WYKR047W 306 nt5.47□□□□□ -1.53
MSH1P25846 YLR326WYLR326W 723 nt5.47□□□□□ -1.53
MSH1P25846 ROT2YBR229C 2865 nt5.47□□□□□ -1.53
MSH1P25846 YTA12YMR089C 2478 nt5.47□□□□□ -1.53
MSH1P25846 YMR306C-AYMR306C-A 390 nt5.46□□□□□ -1.54
MSH1P25846 LST8YNL006W 912 nt5.46□□□□□ -1.54
MSH1P25846 NRM1YNR009W 750 nt5.46□□□□□ -1.54
MSH1P25846 PCL8YPL219W 1479 nt5.45□□□□□ -1.54
MSH1P25846 YHR177WYHR177W 1362 nt5.45□□□□□ -1.54
MSH1P25846 GLE2YER107C 1098 nt5.45□□□□□ -1.54
MSH1P25846 SPO16YHR153C 597 nt5.45□□□□□ -1.54
MSH1P25846 KCH1YJR054W 1494 nt5.45□□□□□ -1.54
MSH1P25846 MNT2YGL257C 1677 nt5.44□□□□□ -1.54
MSH1P25846 YDL034WYDL034W 345 nt5.44□□□□□ -1.54
MSH1P25846 NSE3YDR288W 912 nt5.44□□□□□ -1.54
MSH1P25846 CAB4YGR277C 918 nt5.44□□□□□ -1.54
MSH1P25846 ARN2YHL047C 1863 nt5.44□□□□□ -1.54
MSH1P25846 ATP12YJL180C 978 nt5.44□□□□□ -1.54
MSH1P25846 TEF4YKL081W 1239 nt5.44□□□□□ -1.54
MSH1P25846 SEG2YKL105C 3399 nt5.44□□□□□ -1.54
MSH1P25846 YLR225CYLR225C 1224 nt5.44□□□□□ -1.54
MSH1P25846 PGM2YMR105C 1710 nt5.44□□□□□ -1.54
MSH1P25846 DAL82YNL314W 768 nt5.44□□□□□ -1.54
MSH1P25846 RMI1YPL024W 726 nt5.44□□□□□ -1.54
MSH1P25846 YHL012WYHL012W 1482 nt5.44□□□□□ -1.54
MSH1P25846 HST1YOL068C 1512 nt5.43□□□□□ -1.54
MSH1P25846 MLF3YNL074C 1359 nt5.43□□□□□ -1.54
MSH1P25846 PRO2YOR323C 1371 nt5.43□□□□□ -1.54
MSH1P25846 YPK3YBR028C 1578 nt5.43□□□□□ -1.54
MSH1P25846 ASK10YGR097W 3441 nt5.43□□□□□ -1.54
MSH1P25846 UTR4YEL038W 684 nt5.43□□□□□ -1.54
MSH1P25846 RMR1YGL250W 726 nt5.43□□□□□ -1.54
MSH1P25846 PCT1YGR202C 1275 nt5.43□□□□□ -1.54
MSH1P25846 KTI12YKL110C 942 nt5.43□□□□□ -1.54
MSH1P25846 TFS1YLR178C 660 nt5.43□□□□□ -1.54
MSH1P25846 YIM2YMR151W 438 nt5.43□□□□□ -1.54
MSH1P25846 PEX29YDR479C 1665 nt5.43□□□□□ -1.54
MSH1P25846 ZRC1YMR243C 1329 nt5.43□□□□□ -1.54
MSH1P25846 ABD1YBR236C 1311 nt5.43□□□□□ -1.54
MSH1P25846 YGL036WYGL036W 2730 nt5.42□□□□□ -1.54
MSH1P25846 ADY2YCR010C 852 nt5.42□□□□□ -1.54
MSH1P25846 YCR097W-AYCR097W-A 267 nt5.42□□□□□ -1.54
MSH1P25846 GRX6YDL010W 696 nt5.42□□□□□ -1.54
MSH1P25846 SLC1YDL052C 912 nt5.42□□□□□ -1.54
MSH1P25846 YHL045WYHL045W 348 nt5.42□□□□□ -1.54
MSH1P25846 EFM4YIL064W 774 nt5.42□□□□□ -1.54
MSH1P25846 DCN1YLR128W 810 nt5.42□□□□□ -1.54
MSH1P25846 URE2YNL229C 1065 nt5.42□□□□□ -1.54
MSH1P25846 HRT1YOL133W 366 nt5.42□□□□□ -1.54
MSH1P25846 YOR020W-AYOR020W-A 273 nt5.42□□□□□ -1.54
MSH1P25846 ETR1YBR026C 1143 nt5.42□□□□□ -1.54
MSH1P25846 SMA1YPL027W 738 nt5.42□□□□□ -1.54
MSH1P25846 MET31YPL038W 534 nt5.42□□□□□ -1.54
MSH1P25846 YCL012CYCL012C 405 nt5.42□□□□□ -1.54
MSH1P25846 YGR125WYGR125W 3111 nt5.42□□□□□ -1.54
MSH1P25846 KRE6YPR159W 2163 nt5.42□□□□□ -1.54
MSH1P25846 NDC1YML031W 1968 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 21 ms