Protein–RNA interactions for Protein: P20061

TCN1, Transcobalamin-1, humanhuman

Predicted RBP Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1P20061 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCN1P20061 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
TCN1P20061 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TCN1P20061 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TCN1P20061 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCN1P20061 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCN1P20061 GUSBP5-202ENST00000510805 1989 ntBASIC21.78■■□□□ 1.08
TCN1P20061 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TCN1P20061 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
TCN1P20061 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TCN1P20061 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TCN1P20061 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCN1P20061 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCN1P20061 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TCN1P20061 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCN1P20061 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.77■■□□□ 1.08
TCN1P20061 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
TCN1P20061 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCN1P20061 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCN1P20061 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCN1P20061 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.76■■□□□ 1.07
TCN1P20061 LINC00526-201ENST00000581067 1875 ntBASIC21.76■■□□□ 1.07
TCN1P20061 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCN1P20061 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.76■■□□□ 1.07
TCN1P20061 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCN1P20061 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TCN1P20061 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TCN1P20061 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 AC092068.2-201ENST00000590491 1708 ntBASIC21.75■■□□□ 1.07
TCN1P20061 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCN1P20061 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TCN1P20061 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TCN1P20061 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.75■■□□□ 1.07
TCN1P20061 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCN1P20061 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCN1P20061 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
TCN1P20061 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCN1P20061 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.74■■□□□ 1.07
TCN1P20061 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.74■■□□□ 1.07
TCN1P20061 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCN1P20061 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TCN1P20061 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.74■■□□□ 1.07
TCN1P20061 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCN1P20061 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.73■■□□□ 1.07
TCN1P20061 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.73■■□□□ 1.07
TCN1P20061 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.73■■□□□ 1.07
TCN1P20061 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCN1P20061 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.73■■□□□ 1.07
TCN1P20061 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCN1P20061 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.73■■□□□ 1.07
TCN1P20061 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCN1P20061 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TCN1P20061 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TCN1P20061 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.72■■□□□ 1.07
TCN1P20061 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCN1P20061 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.72■■□□□ 1.07
TCN1P20061 RP9P-202ENST00000450133 1212 ntBASIC21.72■■□□□ 1.07
TCN1P20061 AC093536.1-201ENST00000569153 554 ntBASIC21.72■■□□□ 1.07
TCN1P20061 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.72■■□□□ 1.07
TCN1P20061 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCN1P20061 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCN1P20061 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCN1P20061 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCN1P20061 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCN1P20061 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCN1P20061 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TCN1P20061 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.71■■□□□ 1.07
TCN1P20061 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCN1P20061 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.71■■□□□ 1.07
TCN1P20061 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.71■■□□□ 1.07
TCN1P20061 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCN1P20061 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.7■■□□□ 1.07
TCN1P20061 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.7■■□□□ 1.06
TCN1P20061 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.7■■□□□ 1.06
TCN1P20061 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.7■■□□□ 1.06
TCN1P20061 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCN1P20061 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.69■■□□□ 1.06
TCN1P20061 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCN1P20061 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms