Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.27■■□□□ 1.32
PDGFBP01127 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDGFBP01127 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDGFBP01127 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.27■■□□□ 1.32
PDGFBP01127 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PDGFBP01127 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PDGFBP01127 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.27■■□□□ 1.32
PDGFBP01127 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDGFBP01127 AC097639.1-201ENST00000565519 1891 ntBASIC23.26■■□□□ 1.31
PDGFBP01127 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.26■■□□□ 1.31
PDGFBP01127 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDGFBP01127 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.26■■□□□ 1.31
PDGFBP01127 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.26■■□□□ 1.31
PDGFBP01127 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PDGFBP01127 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDGFBP01127 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.26■■□□□ 1.31
PDGFBP01127 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDGFBP01127 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDGFBP01127 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDGFBP01127 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.25■■□□□ 1.31
PDGFBP01127 MIR572-201ENST00000384983 95 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDGFBP01127 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDGFBP01127 TERF1P2-201ENST00000583350 1212 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 RAP2CP1-201ENST00000605103 478 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 pRNA.6-201ENST00000610482 90 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 pRNA.5-201ENST00000612139 90 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 pRNA.11-201ENST00000618423 90 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 pRNA.13-201ENST00000619112 90 ntBASIC23.25■■□□□ 1.31
PDGFBP01127 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.25■■□□□ 1.31
PDGFBP01127 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
PDGFBP01127 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDGFBP01127 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.25■■□□□ 1.31
PDGFBP01127 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDGFBP01127 AC096887.2-201ENST00000623443 1957 ntBASIC23.24■■□□□ 1.31
PDGFBP01127 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.24■■□□□ 1.31
PDGFBP01127 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.24■■□□□ 1.31
PDGFBP01127 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDGFBP01127 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PDGFBP01127 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDGFBP01127 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PDGFBP01127 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.23■■□□□ 1.31
PDGFBP01127 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.23■■□□□ 1.31
PDGFBP01127 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.23■■□□□ 1.31
PDGFBP01127 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDGFBP01127 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PDGFBP01127 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.23■■□□□ 1.31
PDGFBP01127 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.23■■□□□ 1.31
PDGFBP01127 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFBP01127 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFBP01127 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFBP01127 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
PDGFBP01127 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFBP01127 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.22■■□□□ 1.31
PDGFBP01127 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.22■■□□□ 1.31
PDGFBP01127 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.22■■□□□ 1.31
PDGFBP01127 IGHV3-19-201ENST00000521488 291 ntBASIC23.22■■□□□ 1.31
PDGFBP01127 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.22■■□□□ 1.31
PDGFBP01127 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
PDGFBP01127 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.22■■□□□ 1.31
PDGFBP01127 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDGFBP01127 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDGFBP01127 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PDGFBP01127 CDCA4P2-201ENST00000441182 718 ntBASIC23.21■■□□□ 1.31
PDGFBP01127 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.21■■□□□ 1.31
PDGFBP01127 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.21■■□□□ 1.31
PDGFBP01127 AC104771.1-201ENST00000603335 964 ntBASIC23.21■■□□□ 1.31
PDGFBP01127 AL354811.1-201ENST00000610286 706 ntBASIC23.21■■□□□ 1.31
PDGFBP01127 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.21■■□□□ 1.31
PDGFBP01127 TMEM191A-211ENST00000637163 1067 ntBASIC23.21■■□□□ 1.31
PDGFBP01127 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.21■■□□□ 1.31
PDGFBP01127 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDGFBP01127 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDGFBP01127 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.21■■□□□ 1.31
PDGFBP01127 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDGFBP01127 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDGFBP01127 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.2■■□□□ 1.3
PDGFBP01127 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.2■■□□□ 1.3
PDGFBP01127 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PDGFBP01127 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.2■■□□□ 1.3
PDGFBP01127 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.2■■□□□ 1.3
PDGFBP01127 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.2■■□□□ 1.3
PDGFBP01127 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFBP01127 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFBP01127 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.19■■□□□ 1.3
PDGFBP01127 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.19■■□□□ 1.3
PDGFBP01127 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFBP01127 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.19■■□□□ 1.3
PDGFBP01127 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.19■■□□□ 1.3
PDGFBP01127 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFBP01127 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDGFBP01127 AC073111.5-205ENST00000641717 521 ntBASIC23.19■■□□□ 1.3
PDGFBP01127 LINC02228-203ENST00000641970 1355 ntBASIC23.18■■□□□ 1.3
PDGFBP01127 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.18■■□□□ 1.3
PDGFBP01127 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.18■■□□□ 1.3
PDGFBP01127 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.18■■□□□ 1.3
PDGFBP01127 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.18■■□□□ 1.3
PDGFBP01127 AC066615.1-201ENST00000640911 628 ntBASIC23.18■■□□□ 1.3
PDGFBP01127 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PDGFBP01127 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms