Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
GGPS1O95749 AL031432.3-201ENST00000607698 485 ntBASIC25.7■■□□□ 1.7
GGPS1O95749 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.7■■□□□ 1.7
GGPS1O95749 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.7■■□□□ 1.7
GGPS1O95749 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
GGPS1O95749 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.7■■□□□ 1.7
GGPS1O95749 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
GGPS1O95749 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
GGPS1O95749 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
GGPS1O95749 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
GGPS1O95749 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
GGPS1O95749 AC142381.2-201ENST00000566120 298 ntBASIC25.69■■□□□ 1.7
GGPS1O95749 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
GGPS1O95749 AL161729.1-201ENST00000604104 1402 ntBASIC25.69■■□□□ 1.7
GGPS1O95749 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
GGPS1O95749 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
GGPS1O95749 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
GGPS1O95749 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.68■■□□□ 1.7
GGPS1O95749 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
GGPS1O95749 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.68■■□□□ 1.7
GGPS1O95749 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
GGPS1O95749 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
GGPS1O95749 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
GGPS1O95749 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
GGPS1O95749 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
GGPS1O95749 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
GGPS1O95749 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GGPS1O95749 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GGPS1O95749 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
GGPS1O95749 DUX4L19-201ENST00000557448 1267 ntBASIC25.67■■□□□ 1.7
GGPS1O95749 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
GGPS1O95749 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.67■■□□□ 1.7
GGPS1O95749 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
GGPS1O95749 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.66■■□□□ 1.7
GGPS1O95749 SUDS3P1-201ENST00000505831 966 ntBASIC25.66■■□□□ 1.7
GGPS1O95749 AC099791.2-201ENST00000605725 427 ntBASIC25.66■■□□□ 1.7
GGPS1O95749 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.66■■□□□ 1.7
GGPS1O95749 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
GGPS1O95749 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.66■■□□□ 1.7
GGPS1O95749 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
GGPS1O95749 SYT6-210ENST00000641643 1587 ntBASIC25.65■■□□□ 1.7
GGPS1O95749 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
GGPS1O95749 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
GGPS1O95749 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.65■■□□□ 1.7
GGPS1O95749 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
GGPS1O95749 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.64■■□□□ 1.7
GGPS1O95749 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
GGPS1O95749 EDA-201ENST00000338901 1233 ntBASIC25.64■■□□□ 1.7
GGPS1O95749 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
GGPS1O95749 AC092171.4-201ENST00000609130 632 ntBASIC25.64■■□□□ 1.7
GGPS1O95749 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
GGPS1O95749 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
GGPS1O95749 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GGPS1O95749 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.63■■□□□ 1.69
GGPS1O95749 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
GGPS1O95749 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GGPS1O95749 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GGPS1O95749 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.63■■□□□ 1.69
GGPS1O95749 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
GGPS1O95749 C17orf82-201ENST00000623772 1530 ntBASIC25.63■■□□□ 1.69
GGPS1O95749 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GGPS1O95749 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
GGPS1O95749 AP003733.4-201ENST00000623785 1697 ntBASIC25.62■■□□□ 1.69
GGPS1O95749 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GGPS1O95749 AL355001.2-201ENST00000620617 1191 ntBASIC25.62■■□□□ 1.69
GGPS1O95749 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.62■■□□□ 1.69
GGPS1O95749 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
GGPS1O95749 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
GGPS1O95749 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.61■■□□□ 1.69
GGPS1O95749 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.61■■□□□ 1.69
GGPS1O95749 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 SERBP1P1-201ENST00000396021 1160 ntBASIC25.61■■□□□ 1.69
GGPS1O95749 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
GGPS1O95749 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
GGPS1O95749 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.61■■□□□ 1.69
GGPS1O95749 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.6■■□□□ 1.69
GGPS1O95749 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
GGPS1O95749 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.6■■□□□ 1.69
GGPS1O95749 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.6■■□□□ 1.69
GGPS1O95749 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
GGPS1O95749 ZNRF2P3-201ENST00000424200 374 ntBASIC25.6■■□□□ 1.69
GGPS1O95749 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.6■■□□□ 1.69
GGPS1O95749 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
GGPS1O95749 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
GGPS1O95749 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
GGPS1O95749 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
GGPS1O95749 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
GGPS1O95749 ALDH1A3-203ENST00000557963 1670 ntBASIC25.59■■□□□ 1.69
GGPS1O95749 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms