Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AC239859.2-201ENST00000444165 318 ntBASIC18.19■□□□□ 0.5
NDUFA3O95167 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFA3O95167 MIR4787-201ENST00000607364 84 ntBASIC18.19■□□□□ 0.5
NDUFA3O95167 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFA3O95167 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFA3O95167 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFA3O95167 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFA3O95167 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA3O95167 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA3O95167 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFA3O95167 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDUFA3O95167 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NDUFA3O95167 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFA3O95167 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFA3O95167 MIR6722-201ENST00000617286 78 ntBASIC18.18■□□□□ 0.5
NDUFA3O95167 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDUFA3O95167 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFA3O95167 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFA3O95167 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFA3O95167 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFA3O95167 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.17■□□□□ 0.5
NDUFA3O95167 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NDUFA3O95167 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 AL035685.1-201ENST00000636663 812 ntBASIC18.17■□□□□ 0.5
NDUFA3O95167 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFA3O95167 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFA3O95167 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFA3O95167 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFA3O95167 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NDUFA3O95167 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.16■□□□□ 0.5
NDUFA3O95167 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NDUFA3O95167 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.16■□□□□ 0.5
NDUFA3O95167 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFA3O95167 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFA3O95167 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
NDUFA3O95167 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NDUFA3O95167 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA3O95167 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NDUFA3O95167 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.15■□□□□ 0.5
NDUFA3O95167 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA3O95167 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA3O95167 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.15■□□□□ 0.5
NDUFA3O95167 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.15■□□□□ 0.5
NDUFA3O95167 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFA3O95167 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NDUFA3O95167 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.14■□□□□ 0.5
NDUFA3O95167 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
NDUFA3O95167 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
NDUFA3O95167 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFA3O95167 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
NDUFA3O95167 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFA3O95167 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NDUFA3O95167 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFA3O95167 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFA3O95167 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NDUFA3O95167 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA3O95167 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA3O95167 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.13■□□□□ 0.49
NDUFA3O95167 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDUFA3O95167 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFA3O95167 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFA3O95167 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA3O95167 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.13■□□□□ 0.49
NDUFA3O95167 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.13■□□□□ 0.49
NDUFA3O95167 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NDUFA3O95167 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.13■□□□□ 0.49
NDUFA3O95167 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA3O95167 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFA3O95167 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA3O95167 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFA3O95167 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms