Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPK1BO75841 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK1BO75841 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK1BO75841 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 MIR6090-201ENST00000622481 60 ntBASIC19.93■□□□□ 0.78
UPK1BO75841 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK1BO75841 C11orf96-202ENST00000528572 1834 ntBASIC19.92■□□□□ 0.78
UPK1BO75841 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1BO75841 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1BO75841 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 ESRRAP2-201ENST00000418437 1549 ntBASIC19.92■□□□□ 0.78
UPK1BO75841 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.92■□□□□ 0.78
UPK1BO75841 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK1BO75841 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
UPK1BO75841 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.91■□□□□ 0.78
UPK1BO75841 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UPK1BO75841 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.91■□□□□ 0.78
UPK1BO75841 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UPK1BO75841 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UPK1BO75841 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK1BO75841 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.9■□□□□ 0.78
UPK1BO75841 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK1BO75841 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
UPK1BO75841 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1BO75841 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
UPK1BO75841 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1BO75841 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK1BO75841 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.89■□□□□ 0.77
UPK1BO75841 AL359504.2-201ENST00000605506 1601 ntBASIC19.89■□□□□ 0.77
UPK1BO75841 AC026310.3-201ENST00000625186 2373 ntBASIC19.89■□□□□ 0.77
UPK1BO75841 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.89■□□□□ 0.77
UPK1BO75841 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1BO75841 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
UPK1BO75841 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
UPK1BO75841 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
UPK1BO75841 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
UPK1BO75841 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.88■□□□□ 0.77
UPK1BO75841 SETD8P1-201ENST00000623146 1180 ntBASIC19.88■□□□□ 0.77
UPK1BO75841 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UPK1BO75841 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1BO75841 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UPK1BO75841 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
UPK1BO75841 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
UPK1BO75841 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK1BO75841 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.87■□□□□ 0.77
UPK1BO75841 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.87■□□□□ 0.77
UPK1BO75841 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
UPK1BO75841 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
UPK1BO75841 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms