Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF11O60813 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF11O60813 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF11O60813 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.23■■□□□ 1.31
PRAMEF11O60813 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PRAMEF11O60813 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRAMEF11O60813 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PRAMEF11O60813 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.21■■□□□ 1.31
PRAMEF11O60813 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF11O60813 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.21■■□□□ 1.31
PRAMEF11O60813 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRAMEF11O60813 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
PRAMEF11O60813 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.2■■□□□ 1.3
PRAMEF11O60813 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PRAMEF11O60813 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PRAMEF11O60813 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF11O60813 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF11O60813 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PRAMEF11O60813 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.19■■□□□ 1.3
PRAMEF11O60813 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.19■■□□□ 1.3
PRAMEF11O60813 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF11O60813 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRAMEF11O60813 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF11O60813 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF11O60813 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.18■■□□□ 1.3
PRAMEF11O60813 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRAMEF11O60813 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PRAMEF11O60813 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF11O60813 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF11O60813 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.17■■□□□ 1.3
PRAMEF11O60813 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PRAMEF11O60813 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PRAMEF11O60813 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF11O60813 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.16■■□□□ 1.3
PRAMEF11O60813 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.16■■□□□ 1.3
PRAMEF11O60813 AL117332.1-201ENST00000622628 974 ntBASIC23.16■■□□□ 1.3
PRAMEF11O60813 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.16■■□□□ 1.3
PRAMEF11O60813 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRAMEF11O60813 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.15■■□□□ 1.3
PRAMEF11O60813 MIR3621-201ENST00000580529 85 ntBASIC23.15■■□□□ 1.3
PRAMEF11O60813 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PRAMEF11O60813 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PRAMEF11O60813 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PRAMEF11O60813 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRAMEF11O60813 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.14■■□□□ 1.29
PRAMEF11O60813 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PRAMEF11O60813 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF11O60813 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PRAMEF11O60813 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF11O60813 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF11O60813 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PRAMEF11O60813 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF11O60813 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF11O60813 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PRAMEF11O60813 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.12■■□□□ 1.29
PRAMEF11O60813 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.12■■□□□ 1.29
PRAMEF11O60813 AL356740.2-201ENST00000601559 647 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms