Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGCEO43556 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGCEO43556 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.02■□□□□ 0.8
SGCEO43556 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGCEO43556 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.02■□□□□ 0.79
SGCEO43556 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SGCEO43556 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SGCEO43556 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SGCEO43556 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SGCEO43556 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGCEO43556 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SGCEO43556 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGCEO43556 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.01■□□□□ 0.79
SGCEO43556 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
SGCEO43556 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGCEO43556 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGCEO43556 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGCEO43556 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20■□□□□ 0.79
SGCEO43556 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20■□□□□ 0.79
SGCEO43556 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20■□□□□ 0.79
SGCEO43556 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 RARRES2P1-201ENST00000474487 481 ntBASIC20■□□□□ 0.79
SGCEO43556 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SGCEO43556 AC137630.3-201ENST00000607245 391 ntBASIC20■□□□□ 0.79
SGCEO43556 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
SGCEO43556 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
SGCEO43556 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SGCEO43556 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20■□□□□ 0.79
SGCEO43556 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGCEO43556 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.99■□□□□ 0.79
SGCEO43556 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SGCEO43556 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
SGCEO43556 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SGCEO43556 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.98■□□□□ 0.79
SGCEO43556 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.98■□□□□ 0.79
SGCEO43556 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.98■□□□□ 0.79
SGCEO43556 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SGCEO43556 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.97■□□□□ 0.79
SGCEO43556 AC004448.1-201ENST00000458332 883 ntBASIC19.97■□□□□ 0.79
SGCEO43556 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.97■□□□□ 0.79
SGCEO43556 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SGCEO43556 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.97■□□□□ 0.79
SGCEO43556 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SGCEO43556 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 ALDH1A3-203ENST00000557963 1670 ntBASIC19.97■□□□□ 0.79
SGCEO43556 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SGCEO43556 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SGCEO43556 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SGCEO43556 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.96■□□□□ 0.79
SGCEO43556 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SGCEO43556 BX664725.1-201ENST00000438252 379 ntBASIC19.96■□□□□ 0.79
SGCEO43556 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SGCEO43556 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.96■□□□□ 0.79
SGCEO43556 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.96■□□□□ 0.79
SGCEO43556 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.96■□□□□ 0.79
SGCEO43556 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
SGCEO43556 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.95■□□□□ 0.78
SGCEO43556 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SGCEO43556 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.95■□□□□ 0.78
SGCEO43556 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.95■□□□□ 0.78
SGCEO43556 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SGCEO43556 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SGCEO43556 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
SGCEO43556 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SGCEO43556 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SGCEO43556 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms