Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FOXN1O15353 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.3■■□□□ 1.96
FOXN1O15353 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC27.3■■□□□ 1.96
FOXN1O15353 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
FOXN1O15353 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.3■■□□□ 1.96
FOXN1O15353 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXN1O15353 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXN1O15353 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.3■■□□□ 1.96
FOXN1O15353 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXN1O15353 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FOXN1O15353 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
FOXN1O15353 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
FOXN1O15353 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.29■■□□□ 1.96
FOXN1O15353 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
FOXN1O15353 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
FOXN1O15353 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
FOXN1O15353 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
FOXN1O15353 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
FOXN1O15353 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.28■■□□□ 1.96
FOXN1O15353 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC27.28■■□□□ 1.96
FOXN1O15353 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.28■■□□□ 1.96
FOXN1O15353 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
FOXN1O15353 AC092171.4-201ENST00000609130 632 ntBASIC27.28■■□□□ 1.96
FOXN1O15353 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.28■■□□□ 1.96
FOXN1O15353 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
FOXN1O15353 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
FOXN1O15353 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXN1O15353 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
FOXN1O15353 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.27■■□□□ 1.96
FOXN1O15353 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXN1O15353 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FOXN1O15353 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FOXN1O15353 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXN1O15353 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXN1O15353 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXN1O15353 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.26■■□□□ 1.95
FOXN1O15353 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
FOXN1O15353 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.26■■□□□ 1.95
FOXN1O15353 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.26■■□□□ 1.95
FOXN1O15353 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXN1O15353 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FOXN1O15353 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FOXN1O15353 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FOXN1O15353 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
FOXN1O15353 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC27.25■■□□□ 1.95
FOXN1O15353 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC27.25■■□□□ 1.95
FOXN1O15353 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
FOXN1O15353 AC096887.2-201ENST00000623443 1957 ntBASIC27.24■■□□□ 1.95
FOXN1O15353 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
FOXN1O15353 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
FOXN1O15353 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.24■■□□□ 1.95
FOXN1O15353 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.24■■□□□ 1.95
FOXN1O15353 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.24■■□□□ 1.95
FOXN1O15353 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
FOXN1O15353 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.24■■□□□ 1.95
FOXN1O15353 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
FOXN1O15353 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
FOXN1O15353 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.23■■□□□ 1.95
FOXN1O15353 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.23■■□□□ 1.95
FOXN1O15353 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.23■■□□□ 1.95
FOXN1O15353 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
FOXN1O15353 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FOXN1O15353 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27.22■■□□□ 1.95
FOXN1O15353 AC011298.3-201ENST00000615796 283 ntBASIC27.22■■□□□ 1.95
FOXN1O15353 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.22■■□□□ 1.95
FOXN1O15353 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FOXN1O15353 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FOXN1O15353 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.22■■□□□ 1.95
FOXN1O15353 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.22■■□□□ 1.95
FOXN1O15353 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FOXN1O15353 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
FOXN1O15353 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
FOXN1O15353 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
FOXN1O15353 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.21■■□□□ 1.95
FOXN1O15353 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXN1O15353 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FOXN1O15353 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FOXN1O15353 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
FOXN1O15353 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FOXN1O15353 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.2■■□□□ 1.94
FOXN1O15353 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
FOXN1O15353 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
FOXN1O15353 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.2■■□□□ 1.94
FOXN1O15353 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
FOXN1O15353 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.19■■□□□ 1.94
FOXN1O15353 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.19■■□□□ 1.94
FOXN1O15353 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
FOXN1O15353 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.18■■□□□ 1.94
FOXN1O15353 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
FOXN1O15353 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms