Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
ATP2A1O14983 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ATP2A1O14983 AF213884.3-201ENST00000563833 479 ntBASIC26.23■■□□□ 1.79
ATP2A1O14983 MIR4767-201ENST00000582827 78 ntBASIC26.23■■□□□ 1.79
ATP2A1O14983 AC241377.3-202ENST00000626088 1088 ntBASIC26.23■■□□□ 1.79
ATP2A1O14983 AC241585.3-202ENST00000628937 1088 ntBASIC26.23■■□□□ 1.79
ATP2A1O14983 AC245100.8-202ENST00000629247 1058 ntBASIC26.23■■□□□ 1.79
ATP2A1O14983 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
ATP2A1O14983 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ATP2A1O14983 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ATP2A1O14983 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ATP2A1O14983 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
ATP2A1O14983 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
ATP2A1O14983 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.22■■□□□ 1.79
ATP2A1O14983 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.22■■□□□ 1.79
ATP2A1O14983 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2A1O14983 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.21■■□□□ 1.79
ATP2A1O14983 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
ATP2A1O14983 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2A1O14983 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.21■■□□□ 1.79
ATP2A1O14983 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2A1O14983 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2A1O14983 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.21■■□□□ 1.79
ATP2A1O14983 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.21■■□□□ 1.79
ATP2A1O14983 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.21■■□□□ 1.79
ATP2A1O14983 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.21■■□□□ 1.79
ATP2A1O14983 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
ATP2A1O14983 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
ATP2A1O14983 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP2A1O14983 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
ATP2A1O14983 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2A1O14983 AC091305.1-201ENST00000479476 895 ntBASIC26.2■■□□□ 1.78
ATP2A1O14983 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
ATP2A1O14983 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2A1O14983 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2A1O14983 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2A1O14983 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ATP2A1O14983 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.19■■□□□ 1.78
ATP2A1O14983 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.19■■□□□ 1.78
ATP2A1O14983 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.19■■□□□ 1.78
ATP2A1O14983 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP2A1O14983 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP2A1O14983 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.19■■□□□ 1.78
ATP2A1O14983 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2A1O14983 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2A1O14983 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2A1O14983 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2A1O14983 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
ATP2A1O14983 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP2A1O14983 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2A1O14983 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
ATP2A1O14983 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP2A1O14983 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2A1O14983 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.17■■□□□ 1.78
ATP2A1O14983 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2A1O14983 AC105265.2-201ENST00000467189 838 ntBASIC26.17■■□□□ 1.78
ATP2A1O14983 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2A1O14983 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.17■■□□□ 1.78
ATP2A1O14983 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2A1O14983 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
ATP2A1O14983 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2A1O14983 RARRES2P6-201ENST00000567333 442 ntBASIC26.16■■□□□ 1.78
ATP2A1O14983 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2A1O14983 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
ATP2A1O14983 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2A1O14983 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2A1O14983 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2A1O14983 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2A1O14983 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
ATP2A1O14983 AC026271.2-201ENST00000428091 497 ntBASIC26.15■■□□□ 1.78
ATP2A1O14983 RASA4CP-201ENST00000424092 1398 ntBASIC26.15■■□□□ 1.78
ATP2A1O14983 ALDH1A3-203ENST00000557963 1670 ntBASIC26.15■■□□□ 1.78
ATP2A1O14983 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP2A1O14983 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
ATP2A1O14983 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ATP2A1O14983 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP2A1O14983 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP2A1O14983 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP2A1O14983 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ATP2A1O14983 AC136469.2-201ENST00000623944 1028 ntBASIC26.14■■□□□ 1.78
ATP2A1O14983 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.14■■□□□ 1.78
ATP2A1O14983 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
ATP2A1O14983 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ATP2A1O14983 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.14■■□□□ 1.77
ATP2A1O14983 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ATP2A1O14983 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
ATP2A1O14983 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.13■■□□□ 1.77
ATP2A1O14983 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms