Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
UPK1AO00322 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UPK1AO00322 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.64■■□□□ 1.05
UPK1AO00322 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.63■■□□□ 1.05
UPK1AO00322 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
UPK1AO00322 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
UPK1AO00322 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 AC103834.1-201ENST00000520383 144 ntBASIC21.63■■□□□ 1.05
UPK1AO00322 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.63■■□□□ 1.05
UPK1AO00322 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.63■■□□□ 1.05
UPK1AO00322 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UPK1AO00322 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
UPK1AO00322 KRT18P24-201ENST00000344739 1156 ntBASIC21.62■■□□□ 1.05
UPK1AO00322 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
UPK1AO00322 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
UPK1AO00322 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
UPK1AO00322 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
UPK1AO00322 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UPK1AO00322 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
UPK1AO00322 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
UPK1AO00322 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.61■■□□□ 1.05
UPK1AO00322 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.61■■□□□ 1.05
UPK1AO00322 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.61■■□□□ 1.05
UPK1AO00322 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UPK1AO00322 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UPK1AO00322 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.6■■□□□ 1.05
UPK1AO00322 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
UPK1AO00322 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.6■■□□□ 1.05
UPK1AO00322 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.6■■□□□ 1.05
UPK1AO00322 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UPK1AO00322 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPK1AO00322 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
UPK1AO00322 KRT8P33-201ENST00000508125 1423 ntBASIC21.59■■□□□ 1.05
UPK1AO00322 THA1P-201ENST00000590384 1145 ntBASIC21.59■■□□□ 1.05
UPK1AO00322 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.59■■□□□ 1.05
UPK1AO00322 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPK1AO00322 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
UPK1AO00322 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
UPK1AO00322 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.58■■□□□ 1.05
UPK1AO00322 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.58■■□□□ 1.05
UPK1AO00322 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
UPK1AO00322 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
UPK1AO00322 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.58■■□□□ 1.05
UPK1AO00322 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPK1AO00322 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
UPK1AO00322 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
UPK1AO00322 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
UPK1AO00322 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.57■■□□□ 1.04
UPK1AO00322 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
UPK1AO00322 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 EP400NL-214ENST00000641289 2402 ntBASIC21.56■■□□□ 1.04
UPK1AO00322 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 YBX1P4-201ENST00000392794 808 ntBASIC21.56■■□□□ 1.04
UPK1AO00322 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
UPK1AO00322 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
UPK1AO00322 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPK1AO00322 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
UPK1AO00322 MIR4281-201ENST00000580852 62 ntBASIC21.55■■□□□ 1.04
UPK1AO00322 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.55■■□□□ 1.04
UPK1AO00322 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
UPK1AO00322 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 323.7 ms