Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SAC3D1A6NKF1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SAC3D1A6NKF1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
SAC3D1A6NKF1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SAC3D1A6NKF1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SAC3D1A6NKF1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 FOXO3B-201ENST00000395675 1928 ntBASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SAC3D1A6NKF1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SAC3D1A6NKF1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
SAC3D1A6NKF1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SAC3D1A6NKF1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SAC3D1A6NKF1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.32■■□□□ 1
SAC3D1A6NKF1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SAC3D1A6NKF1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SAC3D1A6NKF1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAC3D1A6NKF1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.31■■□□□ 1
SAC3D1A6NKF1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.31■■□□□ 1
SAC3D1A6NKF1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SAC3D1A6NKF1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SAC3D1A6NKF1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SAC3D1A6NKF1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SAC3D1A6NKF1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.31■■□□□ 1
SAC3D1A6NKF1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.3■■□□□ 1
SAC3D1A6NKF1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 AC025884.2-201ENST00000553429 711 ntBASIC21.3■■□□□ 1
SAC3D1A6NKF1 MIR3960-201ENST00000583311 91 ntBASIC21.3■■□□□ 1
SAC3D1A6NKF1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.3■■□□□ 1
SAC3D1A6NKF1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.3■■□□□ 1
SAC3D1A6NKF1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.29■■□□□ 1
SAC3D1A6NKF1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SAC3D1A6NKF1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 AL157400.5-201ENST00000507624 621 ntBASIC21.29■■□□□ 1
SAC3D1A6NKF1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.29■■□□□ 1
SAC3D1A6NKF1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SAC3D1A6NKF1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SAC3D1A6NKF1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SAC3D1A6NKF1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
SAC3D1A6NKF1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.28■■□□□ 1
SAC3D1A6NKF1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SAC3D1A6NKF1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SAC3D1A6NKF1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SAC3D1A6NKF1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.27■■□□□ 1
SAC3D1A6NKF1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SAC3D1A6NKF1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.27■■□□□ 1
SAC3D1A6NKF1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SAC3D1A6NKF1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SAC3D1A6NKF1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
SAC3D1A6NKF1 AL137060.1-201ENST00000618151 2648 ntBASIC21.27■■□□□ 1
SAC3D1A6NKF1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SAC3D1A6NKF1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
SAC3D1A6NKF1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SAC3D1A6NKF1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
SAC3D1A6NKF1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SAC3D1A6NKF1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms