Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CYP4F23P-201ENST00000593402 1579 ntBASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 RN7SKP214-201ENST00000364208 315 ntBASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AC091812.3-201ENST00000621362 345 ntBASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.07□□□□□ -0.32
CLCF1Q9UBD9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AL157791.1-201ENST00000553667 1699 ntBASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC024681.1-201ENST00000521917 487 ntBASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 CHMP4BP1-201ENST00000556017 588 ntBASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CLCF1Q9UBD9 AC106872.11-201ENST00000605838 421 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms