Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AL031719.1-201ENST00000623365 2587 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 AC027020.2-201ENST00000602585 2389 ntBASIC17.66■□□□□ 0.42
RTN4Q9NQC3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 RABGAP1-213ENST00000616002 1595 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RTN4Q9NQC3 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 ACE3P-201ENST00000423435 1973 ntBASIC17.65■□□□□ 0.42
RTN4Q9NQC3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RTN4Q9NQC3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC17.64■□□□□ 0.42
RTN4Q9NQC3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC17.64■□□□□ 0.42
RTN4Q9NQC3 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RTN4Q9NQC3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.64■□□□□ 0.42
RTN4Q9NQC3 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 UBTFL11-201ENST00000428234 2252 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AL358933.1-201ENST00000565046 2830 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 FAM8A3P-201ENST00000427218 844 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 RNA5SP419-201ENST00000515908 135 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 RNA5SP415-201ENST00000517246 115 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 IGHV3-22-201ENST00000520721 359 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AC104692.2-201ENST00000603054 253 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AC023141.13-201ENST00000604991 943 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 NPTN-IT1-201ENST00000628401 2283 ntBASIC17.64■□□□□ 0.41
RTN4Q9NQC3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTN4Q9NQC3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTN4Q9NQC3 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms