Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 FAM21FP-201ENST00000426241 1131 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 BNIP3P42-201ENST00000454982 569 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 RN7SL713P-201ENST00000582127 302 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 BNIP3P29-201ENST00000598302 571 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC011447.5-201ENST00000616168 564 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 MIR6752-201ENST00000618442 71 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC011840.2-201ENST00000563063 1520 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 LINC01101-201ENST00000622953 1884 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 INE2-201ENST00000630399 1874 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GCM1Q9NP62 CICP23-201ENST00000605013 2741 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 FGD5P1-202ENST00000614866 2498 ntBASIC12.65□□□□□ -0.38
GCM1Q9NP62 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GCM1Q9NP62 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
GCM1Q9NP62 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
GCM1Q9NP62 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
GCM1Q9NP62 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GCM1Q9NP62 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GCM1Q9NP62 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GCM1Q9NP62 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AC020910.5-201ENST00000623668 1865 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 RN7SKP230-201ENST00000365642 335 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AC244107.1-201ENST00000442033 332 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 RNA5SP412-201ENST00000516234 123 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AP003171.2-201ENST00000528208 925 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 C2orf69P2-201ENST00000562032 1123 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 DUX4L45-201ENST00000566406 1057 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms