Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
GABARAPL3Q9BY60 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
GABARAPL3Q9BY60 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.4□□□□□ -0.27
GABARAPL3Q9BY60 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AL391647.1-201ENST00000395664 511 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CNN2P2-201ENST00000443536 909 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CNN2P3-201ENST00000450201 906 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC069120.2-201ENST00000524091 540 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC027369.6-201ENST00000525520 931 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SPDYE22P-201ENST00000582158 798 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 BAP1-211ENST00000615113 489 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 AL136317.3-201ENST00000618497 906 ntBASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
GABARAPL3Q9BY60 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 MKRN5P-201ENST00000445263 1467 ntBASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 KLF2P2-201ENST00000416807 1039 ntBASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 AC136604.1-202ENST00000425471 771 ntBASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 AC125807.1-201ENST00000483097 614 ntBASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
GABARAPL3Q9BY60 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms