Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 MIR661-201ENST00000384842 89 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC098850.1-201ENST00000419919 790 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC134915.1-201ENST00000426461 574 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 DFFBP1-201ENST00000433250 979 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC123567.1-201ENST00000548294 1261 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC120045.2-201ENST00000567334 178 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC093813.1-201ENST00000605066 256 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC004233.3-201ENST00000607794 1269 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AC093726.1-201ENST00000608064 963 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AL928921.2-201ENST00000641325 2442 ntBASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CHRDL1Q9BU40 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 HLA-K-203ENST00000430151 1046 ntBASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 BCRP1-201ENST00000444246 691 ntBASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 MTHFR-210ENST00000641407 2387 ntBASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 AC152010.1-201ENST00000415779 2006 ntBASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CHRDL1Q9BU40 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms