Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 EIF4HP1-201ENST00000453115 687 ntBASIC13.98□□□□□ -0.17
TM9SF4Q92544 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 RN7SL713P-201ENST00000582127 302 ntBASIC13.98□□□□□ -0.17
TM9SF4Q92544 PPY2P-201ENST00000582808 702 ntBASIC13.98□□□□□ -0.17
TM9SF4Q92544 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 NDUFV2P1-201ENST00000596415 907 ntBASIC13.98□□□□□ -0.17
TM9SF4Q92544 AC138649.2-201ENST00000615886 705 ntBASIC13.98□□□□□ -0.17
TM9SF4Q92544 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TM9SF4Q92544 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TM9SF4Q92544 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AC097359.2-201ENST00000604992 2389 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AC027601.5-201ENST00000624065 2482 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AC005077.2-201ENST00000449786 690 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 RHOQP1-201ENST00000555758 579 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 OR10B1P-201ENST00000601666 907 ntBASIC13.97□□□□□ -0.17
TM9SF4Q92544 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.97□□□□□ -0.17
TM9SF4Q92544 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TM9SF4Q92544 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 MIR769-201ENST00000390225 118 ntBASIC13.96□□□□□ -0.17
TM9SF4Q92544 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TM9SF4Q92544 AC004945.1-201ENST00000416738 983 ntBASIC13.96□□□□□ -0.17
TM9SF4Q92544 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.96□□□□□ -0.17
TM9SF4Q92544 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.96□□□□□ -0.17
TM9SF4Q92544 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms