Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
FNDC9Q8TBE3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 AC104306.2-201ENST00000451877 341 ntBASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 AC100850.1-201ENST00000506768 649 ntBASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 AL118558.3-201ENST00000607414 1079 ntBASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FNDC9Q8TBE3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AL390755.1-201ENST00000623716 2027 ntBASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 FAM8A2P-201ENST00000528813 1142 ntBASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 GPR182-203ENST00000622922 591 ntBASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC007191.1-201ENST00000623179 2995 ntBASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms