Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AC011742.3-201ENST00000439053 820 ntBASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 MARK2P5-201ENST00000507649 634 ntBASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST2Q8NFU1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC099063.4-201ENST00000641099 1602 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TMBIM7P-202ENST00000641474 1516 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AL008707.1-201ENST00000422498 534 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC005077.2-201ENST00000449786 690 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC006122.1-201ENST00000493323 440 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 SNORD3B-2-202ENST00000571722 791 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 NDUFV2P1-201ENST00000596415 907 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC133540.1-201ENST00000620845 1019 ntBASIC15.79■□□□□ 0.12
BEST2Q8NFU1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
BEST2Q8NFU1 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 FAM90A7P-201ENST00000382628 1395 ntBASIC15.78■□□□□ 0.12
BEST2Q8NFU1 FAM90A23P-201ENST00000400136 1395 ntBASIC15.78■□□□□ 0.12
BEST2Q8NFU1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.78■□□□□ 0.12
BEST2Q8NFU1 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms