Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 AC097359.2-201ENST00000604992 2389 ntBASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF439Q8NDP4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 AC007969.1-201ENST00000433675 447 ntBASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 MIR5189-201ENST00000577370 114 ntBASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 AC138761.1-201ENST00000584393 385 ntBASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF439Q8NDP4 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 BAATP1-201ENST00000412284 1225 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 FO681548.1-201ENST00000455617 1132 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AC022447.6-201ENST00000515522 438 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AC010319.3-201ENST00000597028 470 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 AL138725.1-201ENST00000407347 1314 ntBASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ZNF439Q8NDP4 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms