Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC092850.2-201ENST00000623821 2697 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ZBED1P1-201ENST00000502364 1930 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC092570.1-201ENST00000414446 469 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AHCYP3-201ENST00000420053 1279 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 GCOM2-201ENST00000509133 1104 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 FBXO36P1-201ENST00000579006 471 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 BX088702.1-201ENST00000610784 235 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AL450487.2-201ENST00000615934 407 ntBASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CCDC168Q8NDH2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 BX088651.3-201ENST00000418155 352 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 KRT18P4-201ENST00000422599 1288 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 AL512599.1-201ENST00000430724 685 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 MIR2278-201ENST00000516344 96 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 EEF1DP7-201ENST00000580496 513 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SALL4P5-201ENST00000419001 1760 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms