Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 MIR943-201ENST00000401286 94 ntBASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AC036164.1-201ENST00000570544 333 ntBASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.36□□□□□ -0.11
TRIML2Q8N7C3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 FP325330.2-201ENST00000624219 5630 ntBASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIML2Q8N7C3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 AL591122.2-201ENST00000624125 1853 ntBASIC14.34□□□□□ -0.11
TRIML2Q8N7C3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms