Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MEG3_2.1-201ENST00000611456 105 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 KRT8P21-201ENST00000430398 1491 ntBASIC16.39■□□□□ 0.21
TRIM50Q86XT4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM50Q86XT4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 SERPINA7P1-201ENST00000443077 631 ntBASIC16.38■□□□□ 0.21
TRIM50Q86XT4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 PRKXP1-201ENST00000561423 1122 ntBASIC16.38■□□□□ 0.21
TRIM50Q86XT4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC012044.1-201ENST00000603431 297 ntBASIC16.38■□□□□ 0.21
TRIM50Q86XT4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC133540.1-201ENST00000620845 1019 ntBASIC16.38■□□□□ 0.21
TRIM50Q86XT4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM50Q86XT4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC006335.1-201ENST00000445200 547 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 EEF1DP6-201ENST00000449232 372 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 CEP164P1-201ENST00000455142 418 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC242376.1-201ENST00000559033 726 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 MIR4754-201ENST00000582477 89 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 RN7SL190P-201ENST00000582519 257 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC092299.1-201ENST00000632679 757 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 AC023157.3-201ENST00000619086 2088 ntBASIC16.37■□□□□ 0.21
TRIM50Q86XT4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms