Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
C11orf88Q6PI97 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 AC015802.1-201ENST00000588104 1449 ntBASIC12.98□□□□□ -0.33
C11orf88Q6PI97 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.98□□□□□ -0.33
C11orf88Q6PI97 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 MIR4453-201ENST00000584019 89 ntBASIC12.98□□□□□ -0.33
C11orf88Q6PI97 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
C11orf88Q6PI97 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 KRT8P37-201ENST00000451609 1420 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC002472.2-201ENST00000442739 958 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 RNA5SP410-201ENST00000516285 106 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 MIR497HG-202ENST00000572453 3838 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC026979.3-201ENST00000607315 403 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC003101.2-201ENST00000612557 442 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC008761.3-201ENST00000624803 892 ntBASIC12.97□□□□□ -0.33
C11orf88Q6PI97 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.97□□□□□ -0.33
C11orf88Q6PI97 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms