Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
H3F3CQ6NXT2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AC079781.5-202ENST00000641784 3743 ntBASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AC106872.11-201ENST00000605838 421 ntBASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 AC138627.1-207ENST00000641560 1006 ntBASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 MRPL37P1-201ENST00000592451 1337 ntBASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
H3F3CQ6NXT2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 FAM90A7P-201ENST00000382628 1395 ntBASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 FAM90A23P-201ENST00000400136 1395 ntBASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 SPTLC1P5-201ENST00000450718 252 ntBASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.62□□□□□ -0.23
H3F3CQ6NXT2 AC125604.1-201ENST00000496255 707 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms