Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LYSMD4Q5XG99 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AC092580.1-201ENST00000433998 658 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AC098934.1-203ENST00000442868 1262 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AC018638.5-201ENST00000450885 754 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 RN7SL665P-201ENST00000578793 300 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AL451007.2-201ENST00000632004 563 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AC136621.1-201ENST00000624017 2304 ntBASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LYSMD4Q5XG99 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC006504.5-208ENST00000588784 2401 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 CICP23-201ENST00000605013 2741 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 RPL35P9-201ENST00000446059 350 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC007952.4-201ENST00000573866 637 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC021016.3-201ENST00000608367 477 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC007250.1-201ENST00000608934 338 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC011471.3-201ENST00000623576 402 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 AC009145.4-201ENST00000625119 1294 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 KHSRPP1-201ENST00000427983 1768 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 NORAD-201ENST00000565493 5339 ntBASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LYSMD4Q5XG99 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms