Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACTA1P68133 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACTA1P68133 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ACTA1P68133 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ACTA1P68133 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 AC241585.1-201ENST00000433527 519 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 AC092183.1-201ENST00000469884 875 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 RN7SL399P-201ENST00000471648 279 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTA1P68133 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.18□□□□□ -0.3
ACTA1P68133 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTA1P68133 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 AL662799.1-202ENST00000614205 422 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ACTA1P68133 CICP16-201ENST00000502609 2813 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 AC079781.5-202ENST00000641784 3743 ntBASIC13.18□□□□□ -0.3
ACTA1P68133 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ACTA1P68133 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.18□□□□□ -0.3
ACTA1P68133 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
ACTA1P68133 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.18□□□□□ -0.3
ACTA1P68133 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 HSPA8P5-201ENST00000456928 2069 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 INTS4P2-202ENST00000614726 2019 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 AC011498.7-201ENST00000624986 2027 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 RNU1-114P-201ENST00000365297 166 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTA1P68133 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTA1P68133 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 AC097493.3-201ENST00000509725 367 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTA1P68133 RRP7BP-205ENST00000566851 833 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.17□□□□□ -0.3
ACTA1P68133 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 AC105206.1-202ENST00000314927 2368 ntBASIC13.17□□□□□ -0.3
ACTA1P68133 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ACTA1P68133 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ACTA1P68133 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ACTA1P68133 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ACTA1P68133 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ACTA1P68133 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms