Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01101-201ENST00000622953 1884 ntBASIC14.32□□□□□ -0.12
PDX1P52945 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.32□□□□□ -0.12
PDX1P52945 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.32□□□□□ -0.12
PDX1P52945 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.32□□□□□ -0.12
PDX1P52945 ISCA2P1-201ENST00000425548 448 ntBASIC14.32□□□□□ -0.12
PDX1P52945 PDIA3P2-201ENST00000428073 158 ntBASIC14.32□□□□□ -0.12
PDX1P52945 VDAC1P1-201ENST00000439229 848 ntBASIC14.32□□□□□ -0.12
PDX1P52945 KLF2P1-201ENST00000447438 1042 ntBASIC14.32□□□□□ -0.12
PDX1P52945 AC116345.2-201ENST00000512837 523 ntBASIC14.32□□□□□ -0.12
PDX1P52945 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.32□□□□□ -0.12
PDX1P52945 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
PDX1P52945 AC132192.2-201ENST00000596206 1147 ntBASIC14.32□□□□□ -0.12
PDX1P52945 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 ACE3P-201ENST00000423435 1973 ntBASIC14.32□□□□□ -0.12
PDX1P52945 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 AL157791.1-201ENST00000553667 1699 ntBASIC14.32□□□□□ -0.12
PDX1P52945 AL161772.1-201ENST00000610494 4412 ntBASIC14.32□□□□□ -0.12
PDX1P52945 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.32□□□□□ -0.12
PDX1P52945 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.31□□□□□ -0.12
PDX1P52945 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.31□□□□□ -0.12
PDX1P52945 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 AC234782.1-201ENST00000451950 919 ntBASIC14.31□□□□□ -0.12
PDX1P52945 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
PDX1P52945 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 AC020922.3-201ENST00000595064 547 ntBASIC14.31□□□□□ -0.12
PDX1P52945 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 AL353770.1-201ENST00000614915 403 ntBASIC14.31□□□□□ -0.12
PDX1P52945 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PDX1P52945 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 AC092978.1-202ENST00000637590 1327 ntBASIC14.31□□□□□ -0.12
PDX1P52945 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
PDX1P52945 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 FGD5P1-202ENST00000614866 2498 ntBASIC14.31□□□□□ -0.12
PDX1P52945 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PDX1P52945 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PDX1P52945 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.3□□□□□ -0.12
PDX1P52945 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDX1P52945 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PDX1P52945 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms