Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 AL512638.1-201ENST00000457493 794 ntBASIC13.42□□□□□ -0.26
HMGA2P52926 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.42□□□□□ -0.26
HMGA2P52926 BAP1-211ENST00000615113 489 ntBASIC13.42□□□□□ -0.26
HMGA2P52926 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 AC004241.5-201ENST00000623870 2448 ntBASIC13.42□□□□□ -0.26
HMGA2P52926 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
HMGA2P52926 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 NUTM2HP-201ENST00000442076 2498 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
HMGA2P52926 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 AP000593.2-201ENST00000542775 1433 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 FTLP10-202ENST00000505798 471 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.41□□□□□ -0.26
HMGA2P52926 AC135782.3-201ENST00000562782 2105 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 AC005586.2-201ENST00000563946 837 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 AP001160.2-201ENST00000596071 487 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.41□□□□□ -0.26
HMGA2P52926 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
HMGA2P52926 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 MARK2P9-201ENST00000430958 1727 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 SBF1P1-201ENST00000444527 5631 ntBASIC13.41□□□□□ -0.26
HMGA2P52926 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.41□□□□□ -0.26
HMGA2P52926 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMGA2P52926 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms