Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 HSPA7-201ENST00000445535 1927 ntBASIC15.56■□□□□ 0.08
RFC1P35251 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RFC1P35251 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RFC1P35251 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFC1P35251 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RFC1P35251 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RFC1P35251 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 AC004945.1-201ENST00000416738 983 ntBASIC15.55■□□□□ 0.08
RFC1P35251 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 ARSEP1-201ENST00000420443 635 ntBASIC15.55■□□□□ 0.08
RFC1P35251 KRT43P-201ENST00000434019 910 ntBASIC15.55■□□□□ 0.08
RFC1P35251 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 GAPDHP21-201ENST00000450301 1010 ntBASIC15.55■□□□□ 0.08
RFC1P35251 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.55■□□□□ 0.08
RFC1P35251 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.55■□□□□ 0.08
RFC1P35251 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 AC103988.2-201ENST00000561804 725 ntBASIC15.55■□□□□ 0.08
RFC1P35251 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.55■□□□□ 0.08
RFC1P35251 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RFC1P35251 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFC1P35251 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.55■□□□□ 0.08
RFC1P35251 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFC1P35251 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.54■□□□□ 0.08
RFC1P35251 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFC1P35251 ALG3P1-201ENST00000508806 1114 ntBASIC15.54■□□□□ 0.08
RFC1P35251 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
RFC1P35251 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.54■□□□□ 0.08
RFC1P35251 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.54■□□□□ 0.08
RFC1P35251 MIR4683-201ENST00000579659 81 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms